Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598138

Identifier: 120598138

GI number: 120598138

Start: 1497560

End: 1498381

Strand: Direct

Name: 120598138

Synonym: Sputw3181_1315

Alternate gene names: NA

Gene position: 1497560-1498381 (Clockwise)

Preceding gene: 120598137

Following gene: 120598139

Centisome position: 31.81

GC content: 39.29

Gene sequence:

>822_bases
ATGAACATAAATAAGCTATTAACTGGATGTGCATTATCTGGCGTTATTCTAGGATTATCAGGCTTACCGTTAGCGCAAGC
GCAAACAGAACTTAAAATCGATGAACGTTGCGATGTGTCTTTAAATTATGATGTTAAGGTTGAGCCTAAAAAATTAGTCA
TGAGTGAGAAGGGGGCTGAGAAGTACCGTATAGAAGTTGATAAGTTATTTGTAGAAGGTAAGCAAGTTAGCTTAACCGAC
AAGCAGAAAAAATTGGTTACTCAATATGCCGATGAAGTGTCGACTCAAGTGCCTGAAGTGATCGAACTTATCAATGAATC
GGTATCTCTTGCATCAAAAGCTGTTGGCATGGCGTTAACCCCATTAATGGGTGATGCGGCTGGCGCTAAATTTGATCAAA
TGATGGTTGGTGTACAAAAGCGGGTAGATACAATTGCTTACAAGCAGGGTGATAGTTTTTATTTAGCGGCCACAGAAGAA
TCGATGCAAAACACTTTTAATGATGAGTTTTCCCAAGAAATGGAACAAATTGTTCAAAATTCTATCGGGACTATTATTAT
GACACTCGGTAGTCAAATAATGTCGGCTAATGGTGATTCATTTGAGGCGAAGATGGATGCTCTTTCTAAAAAAATGGACA
ACTTAGGCCAGGATATTGAGCAACAAATTGAAAGCCAATCTAAGGGGTTGGAGGCTAAGGCGGATCGTTTATGTGATCGA
TTCGAAAATTTACTCGTGCTTGAAAATCAACTGCGTAAAGAGATACCTGCATTAGCACCTTATGCGTTGACGCAAAACAC
TGTCAATCAAGTACGCCAATAA

Upstream 100 bases:

>100_bases
TTCATCATAATCAATACGTTAAAAAGTTGGCGTATATCCTGCTATAGCTATTTAGTGGTGTAGGTCTATTGAATTTCTCA
GATTAAAGGATTGTTAAAAA

Downstream 100 bases:

>100_bases
AGCATTGTGTAAGTTTTATTTCTGTTAGCGCTCAATAATGATTCTGCCCTAATCACGGTAATCGTATTAGGGCTTTTTTA
TTTGAGGATCACGACAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNINKLLTGCALSGVILGLSGLPLAQAQTELKIDERCDVSLNYDVKVEPKKLVMSEKGAEKYRIEVDKLFVEGKQVSLTD
KQKKLVTQYADEVSTQVPEVIELINESVSLASKAVGMALTPLMGDAAGAKFDQMMVGVQKRVDTIAYKQGDSFYLAATEE
SMQNTFNDEFSQEMEQIVQNSIGTIIMTLGSQIMSANGDSFEAKMDALSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR
FENLLVLENQLRKEIPALAPYALTQNTVNQVRQ

Sequences:

>Translated_273_residues
MNINKLLTGCALSGVILGLSGLPLAQAQTELKIDERCDVSLNYDVKVEPKKLVMSEKGAEKYRIEVDKLFVEGKQVSLTD
KQKKLVTQYADEVSTQVPEVIELINESVSLASKAVGMALTPLMGDAAGAKFDQMMVGVQKRVDTIAYKQGDSFYLAATEE
SMQNTFNDEFSQEMEQIVQNSIGTIIMTLGSQIMSANGDSFEAKMDALSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR
FENLLVLENQLRKEIPALAPYALTQNTVNQVRQ
>Mature_273_residues
MNINKLLTGCALSGVILGLSGLPLAQAQTELKIDERCDVSLNYDVKVEPKKLVMSEKGAEKYRIEVDKLFVEGKQVSLTD
KQKKLVTQYADEVSTQVPEVIELINESVSLASKAVGMALTPLMGDAAGAKFDQMMVGVQKRVDTIAYKQGDSFYLAATEE
SMQNTFNDEFSQEMEQIVQNSIGTIIMTLGSQIMSANGDSFEAKMDALSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR
FENLLVLENQLRKEIPALAPYALTQNTVNQVRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30142; Mature: 30142

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKLLTGCALSGVILGLSGLPLAQAQTELKIDERCDVSLNYDVKVEPKKLVMSEKGAE
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEECCCEEECHHHHHHHCCCCH
KYRIEVDKLFVEGKQVSLTDKQKKLVTQYADEVSTQVPEVIELINESVSLASKAVGMALT
HHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLMGDAAGAKFDQMMVGVQKRVDTIAYKQGDSFYLAATEESMQNTFNDEFSQEMEQIVQN
HHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECHHHHHHHHCHHHHHHHHHHHHH
SIGTIIMTLGSQIMSANGDSFEAKMDALSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FENLLVLENQLRKEIPALAPYALTQNTVNQVRQ
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNINKLLTGCALSGVILGLSGLPLAQAQTELKIDERCDVSLNYDVKVEPKKLVMSEKGAE
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEECCCEEECHHHHHHHCCCCH
KYRIEVDKLFVEGKQVSLTDKQKKLVTQYADEVSTQVPEVIELINESVSLASKAVGMALT
HHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLMGDAAGAKFDQMMVGVQKRVDTIAYKQGDSFYLAATEESMQNTFNDEFSQEMEQIVQN
HHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECHHHHHHHHCHHHHHHHHHHHHH
SIGTIIMTLGSQIMSANGDSFEAKMDALSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FENLLVLENQLRKEIPALAPYALTQNTVNQVRQ
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA