Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yggL [H]

Identifier: 120598136

GI number: 120598136

Start: 1496140

End: 1496466

Strand: Direct

Name: yggL [H]

Synonym: Sputw3181_1313

Alternate gene names: 120598136

Gene position: 1496140-1496466 (Clockwise)

Preceding gene: 120598135

Following gene: 120598137

Centisome position: 31.78

GC content: 44.95

Gene sequence:

>327_bases
ATGGCAACTAATCGTAGCCGTCGTTTACGTAAGAAAATGCGCGTCGATGAATTCCAAGAGTTAGGTTTTGATATGACTTG
GACTTTTGATGCATCTGTATCTGAAGCCGATATCGATGCAACGGTAGATAAATTTATCGACGAAGTGATCGAAGCCCGCA
AATTAGGTTTTCACGGCGGCGGCCACATCGAATGGGAAGGCATTATCGCCACCCAAACGATTGGCAAATGTACCGAAGAA
GATATTGCTGCAGTTAAGGCATTCTGGGCGACTCAAAAAGTGTCCCAGGTTGAAGTTAGCGAACTGTACGATATTTGGTG
GGGTTAA

Upstream 100 bases:

>100_bases
CCATAGATTGGGTCACGGTGTATGGGATCTGATGTTTGAGCGTATCGTTTAATCACGAACTCAATTTTAGCTAATTTTAA
ACACAAAAGGGAAAATCACT

Downstream 100 bases:

>100_bases
TGCCCGAGTTGGCATTACTTGAGGAAGTGGTCGAGAAAGTTCGACCCTTGCTCGGCCAAGGAAAAGTTGCAAATTATATC
CCCGCACTGGCTAGCGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MATNRSRRLRKKMRVDEFQELGFDMTWTFDASVSEADIDATVDKFIDEVIEARKLGFHGGGHIEWEGIIATQTIGKCTEE
DIAAVKAFWATQKVSQVEVSELYDIWWG

Sequences:

>Translated_108_residues
MATNRSRRLRKKMRVDEFQELGFDMTWTFDASVSEADIDATVDKFIDEVIEARKLGFHGGGHIEWEGIIATQTIGKCTEE
DIAAVKAFWATQKVSQVEVSELYDIWWG
>Mature_107_residues
ATNRSRRLRKKMRVDEFQELGFDMTWTFDASVSEADIDATVDKFIDEVIEARKLGFHGGGHIEWEGIIATQTIGKCTEED
IAAVKAFWATQKVSQVEVSELYDIWWG

Specific function: Unknown

COG id: COG3171

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0341 [H]

Homologues:

Organism=Escherichia coli, GI87082190, Length=107, Percent_Identity=57.9439252336449, Blast_Score=132, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007416 [H]

Pfam domain/function: PF04320 DUF469 [H]

EC number: NA

Molecular weight: Translated: 12359; Mature: 12228

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNRSRRLRKKMRVDEFQELGFDMTWTFDASVSEADIDATVDKFIDEVIEARKLGFHGG
CCCCHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GHIEWEGIIATQTIGKCTEEDIAAVKAFWATQKVSQVEVSELYDIWWG
CEEEECEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATNRSRRLRKKMRVDEFQELGFDMTWTFDASVSEADIDATVDKFIDEVIEARKLGFHGG
CCCHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GHIEWEGIIATQTIGKCTEEDIAAVKAFWATQKVSQVEVSELYDIWWG
CEEEECEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 2001994 [H]