Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598124

Identifier: 120598124

GI number: 120598124

Start: 1485119

End: 1486369

Strand: Direct

Name: 120598124

Synonym: Sputw3181_1301

Alternate gene names: NA

Gene position: 1485119-1486369 (Clockwise)

Preceding gene: 120598123

Following gene: 120598125

Centisome position: 31.54

GC content: 41.33

Gene sequence:

>1251_bases
ATGAAAAATATCGCTATTGTTGGCACTGGTATCTCAGGTTTAACCTGTGGCCATTTATTGAGTGAGTCACATAAAGTGAC
AGTATTTGAAGCCAATGACTATATTGGTGGTCACACCGCCACTGTCGATATTCATCATCAGGGACAAAATTACGCTATTG
ATACTGGTTTTATCGTATTTAACGACAGAACTTATCCTCGTTTTGAGCGTTTATTGGCTCGTCTTAAGGTAAAGATATTA
CCGACAGAAATGAGTTTTAGTGTGCACAATACGCTGACAGGACTTGAGTATAATGGTCACCACTTTGGTAGTTTATTTGC
TCAAAAGCGGAATATTTTTAACCCTCGTTTTTGGACTTTTTTAAGAGAAATTTTACGCTTTAATAAAAGTTGCAAAGCGA
TTTATCAGCAAGATAAATATCCCGAGGGAAATTTGGGGGATTTTTTAGAGCGAGAACATTTTTCGCCTTTTTTTGCTGAG
CATTATATTTTACCTATGGGAGCGGCGATTTGGTCTTCAAGTATTGAAGATATGCGAGCATTTTCACTGAGGTTCTTTAT
TCGCTTCTTTGAACATCACGGATTATTAAATGTCAGTGATAGACCTCAATGGTATGTGCTTGAAGGCGGTTCTCGTAGTT
ATATTCCTGATTTAATTGCCCCGTTTAAAGAGAGTATTCACTTAAACTCCCCTGTTAGTGCGATTGAACGGCAACACGAT
GGAGTGAGATTGCTCGTTAAAGGTGAGTGGCTTGAGTTTGATGAAGTTATTTTAGCCTGCCATAGTGATCAAGCACTTAG
GATGCTTATGGATCCTACATCGACTGAGAAGGCCGTTCTCGGTGATTTGCAATATCAAGATAACGATGTTGTGCTACATA
CAGACACACGCATTTTACCTCAACGTAAAGCTGCTTGGGCTAGCTGGAACTATCGCTTAGATGGTGATTTAAAGCGCCCC
GCATCAGTCACTTACAATATGAACATTCTGCAACAGTTGCCTGCCAATGCACCGACTTTTTGTATCACGTTGAATCAGTC
AGAATTGATTGATGAGGCTAAAGTATTGCGCCGTTTCACCTACGCTCACCCCGTATTTAATGAGGCCAGTCTCAAGGCAC
AAGCTCGGCGTGAGGAGATTTCAGGCCACAATCATACCCATTTTGCTGGCGCTTATTGGCACAATGGTTTCCATGAAGAT
GGCGTTCGTAGTGCCCTCGATGTGTGTGCACACTTCGGAGTAGAACTATGA

Upstream 100 bases:

>100_bases
GGCGTTTTACTTATTTACTGAAACTATTGTCATTTTTACCTGCTTTTTTATGGCAAAAGATGATGGCTACCAATACCAAG
CCACTTAAGGATCCGAGTCT

Downstream 100 bases:

>100_bases
CGACGCTTAGCAGTGGTATTTATTACGGCACTGTATTCCACAGTCGTTTTACACCCATCAAGCATAATTTCAGCTATGAA
ATGGCATTGCTTGCGATTGA

Product: amine oxidase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDIHHQGQNYAIDTGFIVFNDRTYPRFERLLARLKVKIL
PTEMSFSVHNTLTGLEYNGHHFGSLFAQKRNIFNPRFWTFLREILRFNKSCKAIYQQDKYPEGNLGDFLEREHFSPFFAE
HYILPMGAAIWSSSIEDMRAFSLRFFIRFFEHHGLLNVSDRPQWYVLEGGSRSYIPDLIAPFKESIHLNSPVSAIERQHD
GVRLLVKGEWLEFDEVILACHSDQALRMLMDPTSTEKAVLGDLQYQDNDVVLHTDTRILPQRKAAWASWNYRLDGDLKRP
ASVTYNMNILQQLPANAPTFCITLNQSELIDEAKVLRRFTYAHPVFNEASLKAQARREEISGHNHTHFAGAYWHNGFHED
GVRSALDVCAHFGVEL

Sequences:

>Translated_416_residues
MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDIHHQGQNYAIDTGFIVFNDRTYPRFERLLARLKVKIL
PTEMSFSVHNTLTGLEYNGHHFGSLFAQKRNIFNPRFWTFLREILRFNKSCKAIYQQDKYPEGNLGDFLEREHFSPFFAE
HYILPMGAAIWSSSIEDMRAFSLRFFIRFFEHHGLLNVSDRPQWYVLEGGSRSYIPDLIAPFKESIHLNSPVSAIERQHD
GVRLLVKGEWLEFDEVILACHSDQALRMLMDPTSTEKAVLGDLQYQDNDVVLHTDTRILPQRKAAWASWNYRLDGDLKRP
ASVTYNMNILQQLPANAPTFCITLNQSELIDEAKVLRRFTYAHPVFNEASLKAQARREEISGHNHTHFAGAYWHNGFHED
GVRSALDVCAHFGVEL
>Mature_416_residues
MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDIHHQGQNYAIDTGFIVFNDRTYPRFERLLARLKVKIL
PTEMSFSVHNTLTGLEYNGHHFGSLFAQKRNIFNPRFWTFLREILRFNKSCKAIYQQDKYPEGNLGDFLEREHFSPFFAE
HYILPMGAAIWSSSIEDMRAFSLRFFIRFFEHHGLLNVSDRPQWYVLEGGSRSYIPDLIAPFKESIHLNSPVSAIERQHD
GVRLLVKGEWLEFDEVILACHSDQALRMLMDPTSTEKAVLGDLQYQDNDVVLHTDTRILPQRKAAWASWNYRLDGDLKRP
ASVTYNMNILQQLPANAPTFCITLNQSELIDEAKVLRRFTYAHPVFNEASLKAQARREEISGHNHTHFAGAYWHNGFHED
GVRSALDVCAHFGVEL

Specific function: Unknown

COG id: COG2907

COG function: function code R; Predicted NAD/FAD-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47683; Mature: 47683

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDIHHQGQNYAIDTGFIVF
CCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEE
NDRTYPRFERLLARLKVKILPTEMSFSVHNTLTGLEYNGHHFGSLFAQKRNIFNPRFWTF
CCCCCHHHHHHHHHHEEEEEECCCCEEHHHHEECCEECCCHHHHHHHHHHCCCCCHHHHH
LREILRFNKSCKAIYQQDKYPEGNLGDFLEREHFSPFFAEHYILPMGAAIWSSSIEDMRA
HHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCHHHHHH
FSLRFFIRFFEHHGLLNVSDRPQWYVLEGGSRSYIPDLIAPFKESIHLNSPVSAIERQHD
HHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHCEECCCCHHHHHHCCC
GVRLLVKGEWLEFDEVILACHSDQALRMLMDPTSTEKAVLGDLQYQDNDVVLHTDTRILP
CEEEEEECCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHEECCEECCCCEEEEECCEECC
QRKAAWASWNYRLDGDLKRPASVTYNMNILQQLPANAPTFCITLNQSELIDEAKVLRRFT
CCHHHHCCCCEEECCCCCCCCEEEECHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
YAHPVFNEASLKAQARREEISGHNHTHFAGAYWHNGFHEDGVRSALDVCAHFGVEL
HHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNIAIVGTGISGLTCGHLLSESHKVTVFEANDYIGGHTATVDIHHQGQNYAIDTGFIVF
CCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEE
NDRTYPRFERLLARLKVKILPTEMSFSVHNTLTGLEYNGHHFGSLFAQKRNIFNPRFWTF
CCCCCHHHHHHHHHHEEEEEECCCCEEHHHHEECCEECCCHHHHHHHHHHCCCCCHHHHH
LREILRFNKSCKAIYQQDKYPEGNLGDFLEREHFSPFFAEHYILPMGAAIWSSSIEDMRA
HHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCHHHHHH
FSLRFFIRFFEHHGLLNVSDRPQWYVLEGGSRSYIPDLIAPFKESIHLNSPVSAIERQHD
HHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHCEECCCCHHHHHHCCC
GVRLLVKGEWLEFDEVILACHSDQALRMLMDPTSTEKAVLGDLQYQDNDVVLHTDTRILP
CEEEEEECCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHEECCEECCCCEEEEECCEECC
QRKAAWASWNYRLDGDLKRPASVTYNMNILQQLPANAPTFCITLNQSELIDEAKVLRRFT
CCHHHHCCCCEEECCCCCCCCEEEECHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
YAHPVFNEASLKAQARREEISGHNHTHFAGAYWHNGFHEDGVRSALDVCAHFGVEL
HHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA