Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598125

Identifier: 120598125

GI number: 120598125

Start: 1486366

End: 1487175

Strand: Direct

Name: 120598125

Synonym: Sputw3181_1302

Alternate gene names: NA

Gene position: 1486366-1487175 (Clockwise)

Preceding gene: 120598124

Following gene: 120598126

Centisome position: 31.57

GC content: 40.12

Gene sequence:

>810_bases
ATGACGACGCTTAGCAGTGGTATTTATTACGGCACTGTATTCCACAGTCGTTTTACACCCATCAAGCATAATTTCAGCTA
TGAAATGGCATTGCTTGCGATTGATTTGGATGAGGTTGATAACATCAGTGCGATGGGGCGAATATTTGCCAGTCAGCGCC
GTGCTTTATTGAGATTTAATCCCAAAGATTATCTTATTTCTTTTACAGCTAAAACGGGTGAAACCCGCGAACAGCAAATC
ACAGATTTGAGCACTGCGTCACTTAAAGCTCGAGTGCTTACCCAAGTCGCAGAGCTTGGGGCTGATAAGCTATGTGATCG
AGTGATGTTTGTTGGGCAAATCCGCCATTTTGGTGTGTATTTTAGTCCAGTTAATTTTTATTTTTGTTATCAAAATCAAA
AGCCTTTATATATGTTGGCCGAAGTGAGTAATACACCTTGGAACCAACGTCATTGTTATTTAGTGGATTTAACTACACCG
CAGCCATCGGATAAGGTATTCCATGTTTCGCCTTTTATGACACTGGATATGCGTTATGTTTGGCATGTCTCAGCACCGAC
GGAACATTTAAATATAGGTATTGAGAATAATTCAATACCTAAGGTGATTGGCAATCAAGAGGGGAAAAAGCTCTTTAATG
CTTCTCTTGTAATGAAACGCCAGCCAATTAATGCGGTCAATCTGCGTTCATTTTTATTCCACTTTCCTTTTATGACACTA
AAGATCTTCTTCGGTATTTATTGGCAAGCATTAAAACTCTTTTTCAAACGTGTGCCCTTTGTGCCGCATCCAGCTCAGGT
GGAGAAATAA

Upstream 100 bases:

>100_bases
ACAATCATACCCATTTTGCTGGCGCTTATTGGCACAATGGTTTCCATGAAGATGGCGTTCGTAGTGCCCTCGATGTGTGT
GCACACTTCGGAGTAGAACT

Downstream 100 bases:

>100_bases
TATGGAAAATACAGCTTCGCAAACTTCAGCTATCACAGGGAAGCTTCCTGACAGTCTTGCGCGTAAAGTATTACTTAAGG
CGCTGGAAAGCTTGCCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTTLSSGIYYGTVFHSRFTPIKHNFSYEMALLAIDLDEVDNISAMGRIFASQRRALLRFNPKDYLISFTAKTGETREQQI
TDLSTASLKARVLTQVAELGADKLCDRVMFVGQIRHFGVYFSPVNFYFCYQNQKPLYMLAEVSNTPWNQRHCYLVDLTTP
QPSDKVFHVSPFMTLDMRYVWHVSAPTEHLNIGIENNSIPKVIGNQEGKKLFNASLVMKRQPINAVNLRSFLFHFPFMTL
KIFFGIYWQALKLFFKRVPFVPHPAQVEK

Sequences:

>Translated_269_residues
MTTLSSGIYYGTVFHSRFTPIKHNFSYEMALLAIDLDEVDNISAMGRIFASQRRALLRFNPKDYLISFTAKTGETREQQI
TDLSTASLKARVLTQVAELGADKLCDRVMFVGQIRHFGVYFSPVNFYFCYQNQKPLYMLAEVSNTPWNQRHCYLVDLTTP
QPSDKVFHVSPFMTLDMRYVWHVSAPTEHLNIGIENNSIPKVIGNQEGKKLFNASLVMKRQPINAVNLRSFLFHFPFMTL
KIFFGIYWQALKLFFKRVPFVPHPAQVEK
>Mature_268_residues
TTLSSGIYYGTVFHSRFTPIKHNFSYEMALLAIDLDEVDNISAMGRIFASQRRALLRFNPKDYLISFTAKTGETREQQIT
DLSTASLKARVLTQVAELGADKLCDRVMFVGQIRHFGVYFSPVNFYFCYQNQKPLYMLAEVSNTPWNQRHCYLVDLTTPQ
PSDKVFHVSPFMTLDMRYVWHVSAPTEHLNIGIENNSIPKVIGNQEGKKLFNASLVMKRQPINAVNLRSFLFHFPFMTLK
IFFGIYWQALKLFFKRVPFVPHPAQVEK

Specific function: Unknown

COG id: COG3496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31124; Mature: 30993

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSSGIYYGTVFHSRFTPIKHNFSYEMALLAIDLDEVDNISAMGRIFASQRRALLRFN
CCCCCCCEEEEEEECCCCCCEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHCCEEEEEC
PKDYLISFTAKTGETREQQITDLSTASLKARVLTQVAELGADKLCDRVMFVGQIRHFGVY
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEE
FSPVNFYFCYQNQKPLYMLAEVSNTPWNQRHCYLVDLTTPQPSDKVFHVSPFMTLDMRYV
ECCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEECCCEEEEEEEE
WHVSAPTEHLNIGIENNSIPKVIGNQEGKKLFNASLVMKRQPINAVNLRSFLFHFPFMTL
EEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH
KIFFGIYWQALKLFFKRVPFVPHPAQVEK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TTLSSGIYYGTVFHSRFTPIKHNFSYEMALLAIDLDEVDNISAMGRIFASQRRALLRFN
CCCCCCEEEEEEECCCCCCEECCCCEEEEEEEEEHHHCCCHHHHHHHHHHHCCEEEEEC
PKDYLISFTAKTGETREQQITDLSTASLKARVLTQVAELGADKLCDRVMFVGQIRHFGVY
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEE
FSPVNFYFCYQNQKPLYMLAEVSNTPWNQRHCYLVDLTTPQPSDKVFHVSPFMTLDMRYV
ECCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEECCCEEEEEEEE
WHVSAPTEHLNIGIENNSIPKVIGNQEGKKLFNASLVMKRQPINAVNLRSFLFHFPFMTL
EEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH
KIFFGIYWQALKLFFKRVPFVPHPAQVEK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA