| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598041
Identifier: 120598041
GI number: 120598041
Start: 1376023
End: 1376451
Strand: Direct
Name: 120598041
Synonym: Sputw3181_1218
Alternate gene names: NA
Gene position: 1376023-1376451 (Clockwise)
Preceding gene: 120598039
Following gene: 120598043
Centisome position: 29.22
GC content: 45.45
Gene sequence:
>429_bases ATGCCAGATAAAGTCGTAGAAGTCACCACCCATATGGCAAGCGGTTGGAAAGTCACCGCGCAGGTTCGTGAGCATCTTTT AGTGATAGATCAACCGAGTGCGACTAATGAAGGAGCAAATCCCTTAGAGACCTTTCTGTTTTCATTGGGAGGTTGTATTT CTGCGATTGCCAAGATGGTGGCGCGGGAAAGGCATATTGAGTTACGTCAGTTTGATGTGAATGTGCGTGCCCTAATGAAC TCTACAGGTTTACTAGGCCAGCCTTCGGAAGATCCTGTGGGCTTTAAAGACATTACCATTAACGCCAGTATTGATGCTGA CCTTTCAGAAGATCAGAAACGAGAGTTTTTAGATATTGTGTGTAATCGTTGCCCTGTGCATGACAATCTATTACGTCCCA CACTTGTCACCCATGCGGTTAGAGACTAA
Upstream 100 bases:
>100_bases ATAAAAAATTTCTCATGAGTTTGTGATCTCTGCGGATGATTTTAATTAAATCAATCATTAGTATAATCTGATTGAATAAA ATCTAATGTAGCGTTTTGCA
Downstream 100 bases:
>100_bases AAATTCGTGGAAAATCCCCTCTGCAAAGGCAGAGGGGATGGTGTTCTGGCAATGGCTCTGAATCCGTTAAGCTCAAGTAG CGTCTTTATCATTATGATTG
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; OsmC-Like Protein Superfamily Protein; Redox Protein Regulator Of Disulfide Bond Formation
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPDKVVEVTTHMASGWKVTAQVREHLLVIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERHIELRQFDVNVRALMN STGLLGQPSEDPVGFKDITINASIDADLSEDQKREFLDIVCNRCPVHDNLLRPTLVTHAVRD
Sequences:
>Translated_142_residues MPDKVVEVTTHMASGWKVTAQVREHLLVIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERHIELRQFDVNVRALMN STGLLGQPSEDPVGFKDITINASIDADLSEDQKREFLDIVCNRCPVHDNLLRPTLVTHAVRD >Mature_141_residues PDKVVEVTTHMASGWKVTAQVREHLLVIDQPSATNEGANPLETFLFSLGGCISAIAKMVARERHIELRQFDVNVRALMNS TGLLGQPSEDPVGFKDITINASIDADLSEDQKREFLDIVCNRCPVHDNLLRPTLVTHAVRD
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15719; Mature: 15588
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKVVEVTTHMASGWKVTAQVREHLLVIDQPSATNEGANPLETFLFSLGGCISAIAKMV CCCHHHHHHHHHCCCCEEEHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ARERHIELRQFDVNVRALMNSTGLLGQPSEDPVGFKDITINASIDADLSEDQKREFLDIV HHHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH CNRCPVHDNLLRPTLVTHAVRD HCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure PDKVVEVTTHMASGWKVTAQVREHLLVIDQPSATNEGANPLETFLFSLGGCISAIAKMV CCHHHHHHHHHCCCCEEEHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ARERHIELRQFDVNVRALMNSTGLLGQPSEDPVGFKDITINASIDADLSEDQKREFLDIV HHHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH CNRCPVHDNLLRPTLVTHAVRD HCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA