Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yeiJ [C]

Identifier: 120598010

GI number: 120598010

Start: 1336902

End: 1338161

Strand: Direct

Name: yeiJ [C]

Synonym: Sputw3181_1187

Alternate gene names: 120598010

Gene position: 1336902-1338161 (Clockwise)

Preceding gene: 120598009

Following gene: 120598011

Centisome position: 28.39

GC content: 45.0

Gene sequence:

>1260_bases
ATGAATATATTGATGAGTTTAGTAGGGGTGGTCACCCTACTTGCGATAGGTTTCCTCCTATCGAATAACAAAAAAGCAAT
TAATTTACGTACAGTGGGTGGTGCGTTAGCCATTCAAGCCGCCTTCGGTGGTTTTGTTCTGTATGTTCCCGTAGGTAAAG
ATATTCTGAAAAGTGTATCTGACGCCGTATCTAGCGTTATTGGTTATGCACAAAACGGTATTAGCTTCCTGTTTGGCGAT
TTAGCTAACTTCAAACTTGGTTTTATTTTCGCTGTTAACGTGTTGCCTGTTATCGTGTTCTTCTCTTCTTTAATCGCGGT
ACTGTACTACCTAGGTGTAATGCAGTGGGTCATCCGTATCATCGGTGGCGCGCTACAAAAAGCATTAGGTACAAGCCGTA
CTGAGTCTATGTCAGCAACTGCTAACATTTTCGTTGGTCAAACTGAAGCGCCTTTAGTGGTTCGTCCGTTTATTCCTACG
ATGACGCAGTCTGAACTGTTTGCGATCATGGTGGGTGGTTTAGCATCAATCGCGGGTTCAGTGTTAGCTGGTTACGCGCA
AATGGGCGTGCCTATCGAATACTTAGTTGCCGCTTCATTCATGGCAGCACCAGGTGGCCTATTAATGGCGAAACTGATGC
ACCCAGAAACAGAAGCCGCTAAGAACGATATGGATGAATTACCAGAAGATCCTGATAAGCCAGCGAACGTGTTAGACGCT
GCGGCTGCGGGTGCTTCATCTGGTATGCATTTAGCGCTGAACGTTGGTGCTATGTTGTTAGCCTTCGTAGGTTTGATCGC
GATGATCAACGGTATCATCGGTGGTGTAGGCGGTTGGTTTGGTGTTGAAGGTTTAACACTTGAGCTGATCCTTGGCTACA
TTTTCATGCCATTAGCATTCTTAATTGGTGTGCCTTGGAACGAAGCGTTAGTAGCAGGTTCTTTCATCGGTCAAAAGATC
GTTGTTAACGAATTCGTCGCTTACTTAAACTTTGCTCCATACTTAAAAGACATCGCTGATGGTGGCCTAGTTGTGGCTGA
AACTGGTTTAGCAATGACTGACAGAACCAAAGCGATTATTTCGTTTGCACTGTGTGGTTTCGCTAACTTGTCTTCAATTG
CGATTCTACTGGGTGGTTTAGGCGCTATGGCTCCTAACCGTCGCCATGATTTAGCTAAAATGGGTATTCGTGCGGTTATC
GCCGGCTCTTTAGCTAACTTAATGAGCGCAACACTTGCTGGCTTATTCTTAGCTATCTAA

Upstream 100 bases:

>100_bases
TCAAAACGACGATTTTCGACTTTTCCTCGGGTATAATCTGACGCGGAAATAGGTTGATTAACAACATAATTAAAAAGTGT
TAACAATAGGGTGATGGTTA

Downstream 100 bases:

>100_bases
TTGTTAGCTATCTAAGTTTAAGGGGATGCGCTCCCCAAAACTGGGTCCAGCCCATTGCTGGACTGGACCCAAGTTAATTC
AACCATTTTCCAATAGTGAT

Product: nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVSDAVSSVIGYAQNGISFLFGD
LANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGVMQWVIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT
MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEAAKNDMDELPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKI
VVNEFVAYLNFAPYLKDIADGGLVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPNRRHDLAKMGIRAVI
AGSLANLMSATLAGLFLAI

Sequences:

>Translated_419_residues
MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVSDAVSSVIGYAQNGISFLFGD
LANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGVMQWVIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT
MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEAAKNDMDELPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKI
VVNEFVAYLNFAPYLKDIADGGLVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPNRRHDLAKMGIRAVI
AGSLANLMSATLAGLFLAI
>Mature_419_residues
MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVSDAVSSVIGYAQNGISFLFGD
LANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGVMQWVIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPT
MTQSELFAIMVGGLASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEAAKNDMDELPEDPDKPANVLDA
AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAFLIGVPWNEALVAGSFIGQKI
VVNEFVAYLNFAPYLKDIADGGLVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPNRRHDLAKMGIRAVI
AGSLANLMSATLAGLFLAI

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI227116277, Length=414, Percent_Identity=38.4057971014493, Blast_Score=295, Evalue=4e-80,
Organism=Homo sapiens, GI11545853, Length=374, Percent_Identity=41.7112299465241, Blast_Score=295, Evalue=7e-80,
Organism=Homo sapiens, GI42542381, Length=414, Percent_Identity=37.6811594202899, Blast_Score=291, Evalue=1e-78,
Organism=Escherichia coli, GI1788485, Length=424, Percent_Identity=48.8207547169811, Blast_Score=376, Evalue=1e-105,
Organism=Escherichia coli, GI1788488, Length=424, Percent_Identity=49.5283018867925, Blast_Score=363, Evalue=1e-102,
Organism=Escherichia coli, GI1788737, Length=410, Percent_Identity=30.2439024390244, Blast_Score=179, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17560276, Length=404, Percent_Identity=30.4455445544554, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71991794, Length=407, Percent_Identity=30.7125307125307, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI25146537, Length=194, Percent_Identity=32.9896907216495, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI45552519, Length=415, Percent_Identity=38.5542168674699, Blast_Score=294, Evalue=6e-80,
Organism=Drosophila melanogaster, GI45552517, Length=415, Percent_Identity=38.5542168674699, Blast_Score=294, Evalue=6e-80,
Organism=Drosophila melanogaster, GI19921868, Length=415, Percent_Identity=38.5542168674699, Blast_Score=294, Evalue=6e-80,
Organism=Drosophila melanogaster, GI281360430, Length=411, Percent_Identity=37.2262773722628, Blast_Score=266, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43499; Mature: 43499

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHH
DAVSSVIGYAQNGISFLFGDLANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGVMQWVIRI
HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS
HHHHHHHHHCCCCHHHHCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
VLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEAAKNDMDELPEDPDKPANVLDA
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCHHHCCCCCCCCHHHHHH
AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAF
HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
LIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGLVVAETGLAMTDRTKAII
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
SFALCGFANLSSIAILLGGLGAMAPNRRHDLAKMGIRAVIAGSLANLMSATLAGLFLAI
HHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILMSLVGVVTLLAIGFLLSNNKKAINLRTVGGALAIQAAFGGFVLYVPVGKDILKSVS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEEECCHHHHHHHH
DAVSSVIGYAQNGISFLFGDLANFKLGFIFAVNVLPVIVFFSSLIAVLYYLGVMQWVIRI
HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIPTMTQSELFAIMVGGLASIAGS
HHHHHHHHHCCCCHHHHCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
VLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEAAKNDMDELPEDPDKPANVLDA
HHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCHHHCCCCCCCCHHHHHH
AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVGGWFGVEGLTLELILGYIFMPLAF
HHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
LIGVPWNEALVAGSFIGQKIVVNEFVAYLNFAPYLKDIADGGLVVAETGLAMTDRTKAII
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
SFALCGFANLSSIAILLGGLGAMAPNRRHDLAKMGIRAVIAGSLANLMSATLAGLFLAI
HHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]