Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597961

Identifier: 120597961

GI number: 120597961

Start: 1287161

End: 1287415

Strand: Direct

Name: 120597961

Synonym: Sputw3181_1138

Alternate gene names: NA

Gene position: 1287161-1287415 (Clockwise)

Preceding gene: 120597960

Following gene: 120597962

Centisome position: 27.34

GC content: 43.14

Gene sequence:

>255_bases
ATGAAAGGCATGCTGAGCTCACTAGAGATTTATCTGTATCGTGAAAGTGTCGATTTTAGAAAGTCCATCAACGGCCTTGC
CGCGATTATCGAAAGTGACACCGATTTACCGTTAGTAAGTGGCGCATTATTCCTGTTCACCAAAAACAGCGCGATAAAAT
CAAAGTGTTGTGCTGGCGTGTGCCACGAACAAAAGGTTAATACCTTTTGGATCTGTATTTCTGATGAGAGAAGGCCTCTC
GAAATCTACCTGTAG

Upstream 100 bases:

>100_bases
TGGCAACCGCCAACATGACACTCTTCGTCAATGATATCGAACTGCGCAATCCCCAATGCACGCCAGTAAGTAACCTGGCT
GAACTCATCGGTGCGCTATC

Downstream 100 bases:

>100_bases
GGGGCGGTTTCAAAACCACCAAGTGCTTCTGTAAAGTGCGGTTTGGAGACTTATCTGATCGCTCATTCAACACTGAGTTC
ACCTTCGCAGGTGATCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MKGMLSSLEIYLYRESVDFRKSINGLAAIIESDTDLPLVSGALFLFTKNSAIKSKCCAGVCHEQKVNTFWICISDERRPL
EIYL

Sequences:

>Translated_84_residues
MKGMLSSLEIYLYRESVDFRKSINGLAAIIESDTDLPLVSGALFLFTKNSAIKSKCCAGVCHEQKVNTFWICISDERRPL
EIYL
>Mature_84_residues
MKGMLSSLEIYLYRESVDFRKSINGLAAIIESDTDLPLVSGALFLFTKNSAIKSKCCAGVCHEQKVNTFWICISDERRPL
EIYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9492; Mature: 9492

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGMLSSLEIYLYRESVDFRKSINGLAAIIESDTDLPLVSGALFLFTKNSAIKSKCCAGV
CCCCCCCEEEEEEECCCCHHHHHHHHEEEEECCCCCCEECCEEEEEECCCCHHHHHHHCC
CHEQKVNTFWICISDERRPLEIYL
CCCCCCCEEEEEECCCCCCEEEEC
>Mature Secondary Structure
MKGMLSSLEIYLYRESVDFRKSINGLAAIIESDTDLPLVSGALFLFTKNSAIKSKCCAGV
CCCCCCCEEEEEEECCCCHHHHHHHHEEEEECCCCCCEECCEEEEEECCCCHHHHHHHCC
CHEQKVNTFWICISDERRPLEIYL
CCCCCCCEEEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA