| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597960
Identifier: 120597960
GI number: 120597960
Start: 1286021
End: 1286191
Strand: Direct
Name: 120597960
Synonym: Sputw3181_1136
Alternate gene names: NA
Gene position: 1286021-1286191 (Clockwise)
Preceding gene: 120597959
Following gene: 120597961
Centisome position: 27.31
GC content: 46.78
Gene sequence:
>171_bases ATGACATGTGGGGGCTGCGCCCGGACGGTAACTAAAGCAATTAAGGATATAGACCCAGAGGCTACAGTTTTAACTGATCC TCCGACTCGTAAGGTGACGGTAAAAACTTCATTATCAGTTGAAAAGGTCTCCTATGCTCTAATTGAAGCAGGCTTCCCTC CTCGGGATTAG
Upstream 100 bases:
>100_bases AAATGAGTTTAGACCTTGACCTTACAACAGTGGAAAGCCCTACAATCAGAAGTACTCAAACCAAACTGGAGGTATATAAA TGCAATTTCATTTAGAAAAT
Downstream 100 bases:
>100_bases TATTTTCCTTTTACGGTTGCCTCCTGAATGAGGCAACTTTAAATTTCGCATTCAGGGCATTCATTCATAGACTGGACCTT AAGAATTAAGCCCATGCAGT
Product: putative copper chaperone
Products: NA
Alternate protein names: Heavy Metal Transport/Detoxification Protein
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MTCGGCARTVTKAIKDIDPEATVLTDPPTRKVTVKTSLSVEKVSYALIEAGFPPRD
Sequences:
>Translated_56_residues MTCGGCARTVTKAIKDIDPEATVLTDPPTRKVTVKTSLSVEKVSYALIEAGFPPRD >Mature_55_residues TCGGCARTVTKAIKDIDPEATVLTDPPTRKVTVKTSLSVEKVSYALIEAGFPPRD
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5979; Mature: 5848
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCGGCARTVTKAIKDIDPEATVLTDPPTRKVTVKTSLSVEKVSYALIEAGFPPRD CCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TCGGCARTVTKAIKDIDPEATVLTDPPTRKVTVKTSLSVEKVSYALIEAGFPPRD CCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA