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The map label for this gene is 120597654

Identifier: 120597654

GI number: 120597654

Start: 926854

End: 928521

Strand: Direct

Name: 120597654

Synonym: Sputw3181_0823

Alternate gene names: NA

Gene position: 926854-928521 (Clockwise)

Preceding gene: 120597653

Following gene: 120597655

Centisome position: 19.69

GC content: 47.96

Gene sequence:

>1668_bases
ATGTTGGCATTAAACGCAAATAATCAAAATGTTACCCGTAGCACTGGAGCGCTCAAGTTGGCAATCATCGATCCCATAGT
GAATGGTTTAAATTCAGGTTGGCAGCATATAGATGCGAGCCTATTGCAGGCAAACCAGCAATTTGAAGCTGATGTGATTA
TTGTTGGCACGGGTGCAGGGGGCGGTGTCGCGGCTGAAATTCTTACTCAAGCAGGACTGAGTGTCATCATGGTTGAAGCG
GGGCCGCTTAAATCTTCCAGTGATTTTGATATGGAAGAGCGCGTCGCTTACCCGAATTTATATCAACAAGCGGCCGCCAT
GAAAACCGCCGACAAAGCGATTGGTATCTTCCAAGGCCGCGCCGTTGGCGGTTCGACAACGGTAAATTGGACGACCTCGA
TTCGTACTCCGGCTGAGACGTTAGCCTTTTGGGAGCAAAATAAGTCCGTCGCTGGATTAACATCAGAAAGCTTAGCCCCT
TGGTTTGAGCAAATGGAGCAGCGCCTAAATATCCACCAATGGAATTATGAACCTAATCGCAATAATGCAGCGTTAAAGCA
AGGCTGCATTAATCTTGGTTGGGATTACACTGTGATTAAGCGTAATGTAGCGGGTTGCTGGAATACCGGCTATTGCGGTA
TGGGTTGCCCAGTGAATGCCAAGCAATCTATGTTAGTGACCACCATTCCCGCGGCGCTAGATAAAGGTGCACAGTTGGTA
AGTCGCGCAAAAGTGGTGAACATTGAGCATCATAACGGTCATGTTTTTGCATTAAAGGCACAGGCACAGGATGTGAACTT
AAGGCCAACCGCCATTGAGTTGTTATTTAAGGCCAAACATTACATCTTGAGTGCTGGCGCCATTCATACTCCAGCGCTTT
TAATGCGTTCTCAAGTGCCCGATCCCCACAAGCTTTTGGGTAAACGCACCTTTTTACATCCAACTTTGCTCTCTGGTGGC
GTGTTTGCCGATGCGATTAATGCTCACAGTGGTGCACCGCAATCCATTTATTCCGATGAGTTTGTTTGGAAAAATGGTGC
AGAGGGGGAGCTGGGTTATAAGCTCGAAGTACCGCCTGTACATCCCATACTCATTGCCTCTAAAACCTTAGGTTATGGCA
TGAGCCACGCTGAGCTAATGTCACAATTTAATCAATTACAGGTGACTATCGCCCTTGTGCGTGATGGTTATCACCCCGAG
AGTCAGGGGGGGCAAGTGCATTTAACATCAACAGGTTTTGCCTTAGATTATCCTCTGACCGATATTTTTTGGCGTGCGGC
GAGACGCGCCTTTGCCAGTATGGCCGAGTTACAATTCTCTGCGGGCGCGTTAAGAGTGTTACCGATTAGCGATGGCATGC
CCTATTTGTCTTCATGGAAAGAGGCCAAAGAAAGCATTGCCCAGATGTCGCTCGCGCCACTGCGCACTGTGGTGGCATCG
GCCCATGTGATGGGAGGATGTCCTTTGGGTGAAGATAAAAAACTTGCGATGGTTGACAGTGATGGACAGTCACATTATTT
AGAAAACTTGTCGGTAATGGATGGTTCTATCTTTCCGACGAGCCTAGGTGCTAATCCACAATTGTCGATTTATGGCATTA
CGGCACGTAATGCGAGCAAACTAGCAGAGAGACTCGCGGCAAAACTCAGTGTAGGGGACAAGGTTTAG

Upstream 100 bases:

>100_bases
GACTACGGGAATTAGTGATGGCAAGTTACTACGCCTGCCCTGAGCATTGGAGTCGTCTGCATTATGCCAAGCCTGAGTTA
TTCAAATAACGATTCTGTTA

Downstream 100 bases:

>100_bases
TATGACTGAAGAATTCCTTTTAGAAGGTGGTTGCCTGTGTGGGGCGATTCGTTATCGGCTCGATGGTGAACCCTTTGATG
CGGATTATTGCCACTGCCGT

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLALNANNQNVTRSTGALKLAIIDPIVNGLNSGWQHIDASLLQANQQFEADVIIVGTGAGGGVAAEILTQAGLSVIMVEA
GPLKSSSDFDMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPAETLAFWEQNKSVAGLTSESLAP
WFEQMEQRLNIHQWNYEPNRNNAALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPAALDKGAQLV
SRAKVVNIEHHNGHVFALKAQAQDVNLRPTAIELLFKAKHYILSAGAIHTPALLMRSQVPDPHKLLGKRTFLHPTLLSGG
VFADAINAHSGAPQSIYSDEFVWKNGAEGELGYKLEVPPVHPILIASKTLGYGMSHAELMSQFNQLQVTIALVRDGYHPE
SQGGQVHLTSTGFALDYPLTDIFWRAARRAFASMAELQFSAGALRVLPISDGMPYLSSWKEAKESIAQMSLAPLRTVVAS
AHVMGGCPLGEDKKLAMVDSDGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNASKLAERLAAKLSVGDKV

Sequences:

>Translated_555_residues
MLALNANNQNVTRSTGALKLAIIDPIVNGLNSGWQHIDASLLQANQQFEADVIIVGTGAGGGVAAEILTQAGLSVIMVEA
GPLKSSSDFDMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPAETLAFWEQNKSVAGLTSESLAP
WFEQMEQRLNIHQWNYEPNRNNAALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPAALDKGAQLV
SRAKVVNIEHHNGHVFALKAQAQDVNLRPTAIELLFKAKHYILSAGAIHTPALLMRSQVPDPHKLLGKRTFLHPTLLSGG
VFADAINAHSGAPQSIYSDEFVWKNGAEGELGYKLEVPPVHPILIASKTLGYGMSHAELMSQFNQLQVTIALVRDGYHPE
SQGGQVHLTSTGFALDYPLTDIFWRAARRAFASMAELQFSAGALRVLPISDGMPYLSSWKEAKESIAQMSLAPLRTVVAS
AHVMGGCPLGEDKKLAMVDSDGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNASKLAERLAAKLSVGDKV
>Mature_555_residues
MLALNANNQNVTRSTGALKLAIIDPIVNGLNSGWQHIDASLLQANQQFEADVIIVGTGAGGGVAAEILTQAGLSVIMVEA
GPLKSSSDFDMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPAETLAFWEQNKSVAGLTSESLAP
WFEQMEQRLNIHQWNYEPNRNNAALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPAALDKGAQLV
SRAKVVNIEHHNGHVFALKAQAQDVNLRPTAIELLFKAKHYILSAGAIHTPALLMRSQVPDPHKLLGKRTFLHPTLLSGG
VFADAINAHSGAPQSIYSDEFVWKNGAEGELGYKLEVPPVHPILIASKTLGYGMSHAELMSQFNQLQVTIALVRDGYHPE
SQGGQVHLTSTGFALDYPLTDIFWRAARRAFASMAELQFSAGALRVLPISDGMPYLSSWKEAKESIAQMSLAPLRTVVAS
AHVMGGCPLGEDKKLAMVDSDGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNASKLAERLAAKLSVGDKV

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 59743; Mature: 59743

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALNANNQNVTRSTGALKLAIIDPIVNGLNSGWQHIDASLLQANQQFEADVIIVGTGAG
CEEECCCCCCEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
GGVAAEILTQAGLSVIMVEAGPLKSSSDFDMEERVAYPNLYQQAAAMKTADKAIGIFQGR
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECC
AVGGSTTVNWTTSIRTPAETLAFWEQNKSVAGLTSESLAPWFEQMEQRLNIHQWNYEPNR
CCCCCCEEEEEEECCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCEEEECCCCCC
NNAALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPAALDKGAQLV
CCHHHHHCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
SRAKVVNIEHHNGHVFALKAQAQDVNLRPTAIELLFKAKHYILSAGAIHTPALLMRSQVP
HHEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCC
DPHKLLGKRTFLHPTLLSGGVFADAINAHSGAPQSIYSDEFVWKNGAEGELGYKLEVPPV
CHHHHHCCHHCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCC
HPILIASKTLGYGMSHAELMSQFNQLQVTIALVRDGYHPESQGGQVHLTSTGFALDYPLT
CEEEEEEHHHCCCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCEEEEEECCEEEECCHH
DIFWRAARRAFASMAELQFSAGALRVLPISDGMPYLSSWKEAKESIAQMSLAPLRTVVAS
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AHVMGGCPLGEDKKLAMVDSDGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNASK
HHHCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHH
LAERLAAKLSVGDKV
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MLALNANNQNVTRSTGALKLAIIDPIVNGLNSGWQHIDASLLQANQQFEADVIIVGTGAG
CEEECCCCCCEEECCCCEEEEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
GGVAAEILTQAGLSVIMVEAGPLKSSSDFDMEERVAYPNLYQQAAAMKTADKAIGIFQGR
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECC
AVGGSTTVNWTTSIRTPAETLAFWEQNKSVAGLTSESLAPWFEQMEQRLNIHQWNYEPNR
CCCCCCEEEEEEECCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCEEEECCCCCC
NNAALKQGCINLGWDYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPAALDKGAQLV
CCHHHHHCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
SRAKVVNIEHHNGHVFALKAQAQDVNLRPTAIELLFKAKHYILSAGAIHTPALLMRSQVP
HHEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCC
DPHKLLGKRTFLHPTLLSGGVFADAINAHSGAPQSIYSDEFVWKNGAEGELGYKLEVPPV
CHHHHHCCHHCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCC
HPILIASKTLGYGMSHAELMSQFNQLQVTIALVRDGYHPESQGGQVHLTSTGFALDYPLT
CEEEEEEHHHCCCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCEEEEEECCEEEECCHH
DIFWRAARRAFASMAELQFSAGALRVLPISDGMPYLSSWKEAKESIAQMSLAPLRTVVAS
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AHVMGGCPLGEDKKLAMVDSDGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNASK
HHHCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHH
LAERLAAKLSVGDKV
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]