Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597597

Identifier: 120597597

GI number: 120597597

Start: 850907

End: 852349

Strand: Direct

Name: 120597597

Synonym: Sputw3181_0766

Alternate gene names: NA

Gene position: 850907-852349 (Clockwise)

Preceding gene: 120597593

Following gene: 120597598

Centisome position: 18.07

GC content: 45.11

Gene sequence:

>1443_bases
ATGCGAGCTAATCGAATCTCTTGGCCAATGGCTGTGCTAGCGGGCATGGTTGTTGTACAACTCGCAGGCTGTAGCGACCC
TAAACCTACGGCTGTAATTGAAAGCAATAACGAATCATTAGTGCAGTTTGATAACGGTAAACTCATTCAATTGAAGGAAA
AACCGAGTCCACAATACCGTCATATTCCCTGTGATTTACCCACGCTAGCCTCCGTTATAGCAAATAATATGGCTATTGCA
GCTATCACCCAAAATGGCGATGTGATCACTTGGGGTAACAGTTTTAGCGGCGGCGATAGCCGTGAAGTGACAGATCAACT
TAAAGATGTCATCCAAATTGTGCCAGTTAAGGACGGCTTTGCTGCGCTGCGTAAGAATGGCACTGTGGTGTACTGGGGTA
ATGCGGGGAAATTGAGCCTCGACAAAGCACTACAAAACCGCATGACCAATATTACCAAGTTGTTCGCCAATCAAGAGGCC
ATTGCTGCTCTAGATGCCAATGGCAAAGTACACACTTGGGGTTATGGCCCGTATGGTGGTAATAGCTTACATGTGCAGGA
TCAGCTTATTGATGTAATTGATATCGTTGCTGCAGGGCGAAGTTTTACGGCACTAAAAAAAGACGGTAGTACTGTGATTT
GGGGAAAAATTGAAAGCTCTACCAATATGAAAAAGCTGCTACCGCAACTTAAGGATGTCGTCAGCGTCGAGTACACTCAT
GGTACCTTTGCTGCTTTGAAAAAGGATGGCACTGTCGTGACTTGGGGGCATAGTAGTGATGTTTATCCTATTCGCGGTGC
GTTACAGGATGTGGCCAGTATTACGACAAATCGCTGTGCCTTTGCCATCTTAAGTCCTACGGGTGAGGCGCACTTTTGGG
GTAATTCAACGAACTGCGGTATCGATTGGCTCAAACAAACGGGAATTAAAGGTGTGAGCAGTATTGTTAGCGTAGATACA
GGTTTTTTGTTATTGCGTGACAATGCTGTACCGCAAATTATCGTCGACGATACTGACTACGCTTATCTGTATGGTTTTCA
TTATGCCCAAGACATTCTCAATCAATATTGGCAGGAAGGGAGCCGTATTATCAGCGGGCAAGCATCATTTGTGTTTATTC
GCCCAGATGGTAAGGTCGTGCCAGTAGGCTATCGAGCTAATCTCGAAAATGTCCAGAAGTTAATAGCAAGCATTCCGCGA
TTAACTTGGTTAGGTGCAACAGATGATGGTTATGTCGGGCTCAGTGAAAAAGGAGAGTGGGTATCTTGGTCGATGAATAC
CGATACGTTTGCTACATCTTCTGTAAAGGTTGCCGATTCACTCGTGATTAAGCCCCTCGATTTTTCGGCTCCAACACAAT
GTGAAACGCAGGAGCAGCGTCAGGACATTTTGAGTAAAGAAAGACCAAATCCTGAAGTTAAAATGTGGTCGTTTAGCGAA
TAG

Upstream 100 bases:

>100_bases
CGCCTTTTCGCGATAAGCTGCTAGAATCGCGCGCATTTTATTGCTGTAAAAATTGAGTGCTGTAAAAATTGAGCGATACA
ACAAATACAAGGAAATAGTA

Downstream 100 bases:

>100_bases
GTGCTTGTTTGAGTTTAATGGACTTTCATCCGTATAGACGTCTATAATGCTCGCGCTTGATGTAGAGTAGATAGGTATAA
AGAAATGAATGACGTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MRANRISWPMAVLAGMVVVQLAGCSDPKPTAVIESNNESLVQFDNGKLIQLKEKPSPQYRHIPCDLPTLASVIANNMAIA
AITQNGDVITWGNSFSGGDSREVTDQLKDVIQIVPVKDGFAALRKNGTVVYWGNAGKLSLDKALQNRMTNITKLFANQEA
IAALDANGKVHTWGYGPYGGNSLHVQDQLIDVIDIVAAGRSFTALKKDGSTVIWGKIESSTNMKKLLPQLKDVVSVEYTH
GTFAALKKDGTVVTWGHSSDVYPIRGALQDVASITTNRCAFAILSPTGEAHFWGNSTNCGIDWLKQTGIKGVSSIVSVDT
GFLLLRDNAVPQIIVDDTDYAYLYGFHYAQDILNQYWQEGSRIISGQASFVFIRPDGKVVPVGYRANLENVQKLIASIPR
LTWLGATDDGYVGLSEKGEWVSWSMNTDTFATSSVKVADSLVIKPLDFSAPTQCETQEQRQDILSKERPNPEVKMWSFSE

Sequences:

>Translated_480_residues
MRANRISWPMAVLAGMVVVQLAGCSDPKPTAVIESNNESLVQFDNGKLIQLKEKPSPQYRHIPCDLPTLASVIANNMAIA
AITQNGDVITWGNSFSGGDSREVTDQLKDVIQIVPVKDGFAALRKNGTVVYWGNAGKLSLDKALQNRMTNITKLFANQEA
IAALDANGKVHTWGYGPYGGNSLHVQDQLIDVIDIVAAGRSFTALKKDGSTVIWGKIESSTNMKKLLPQLKDVVSVEYTH
GTFAALKKDGTVVTWGHSSDVYPIRGALQDVASITTNRCAFAILSPTGEAHFWGNSTNCGIDWLKQTGIKGVSSIVSVDT
GFLLLRDNAVPQIIVDDTDYAYLYGFHYAQDILNQYWQEGSRIISGQASFVFIRPDGKVVPVGYRANLENVQKLIASIPR
LTWLGATDDGYVGLSEKGEWVSWSMNTDTFATSSVKVADSLVIKPLDFSAPTQCETQEQRQDILSKERPNPEVKMWSFSE
>Mature_480_residues
MRANRISWPMAVLAGMVVVQLAGCSDPKPTAVIESNNESLVQFDNGKLIQLKEKPSPQYRHIPCDLPTLASVIANNMAIA
AITQNGDVITWGNSFSGGDSREVTDQLKDVIQIVPVKDGFAALRKNGTVVYWGNAGKLSLDKALQNRMTNITKLFANQEA
IAALDANGKVHTWGYGPYGGNSLHVQDQLIDVIDIVAAGRSFTALKKDGSTVIWGKIESSTNMKKLLPQLKDVVSVEYTH
GTFAALKKDGTVVTWGHSSDVYPIRGALQDVASITTNRCAFAILSPTGEAHFWGNSTNCGIDWLKQTGIKGVSSIVSVDT
GFLLLRDNAVPQIIVDDTDYAYLYGFHYAQDILNQYWQEGSRIISGQASFVFIRPDGKVVPVGYRANLENVQKLIASIPR
LTWLGATDDGYVGLSEKGEWVSWSMNTDTFATSSVKVADSLVIKPLDFSAPTQCETQEQRQDILSKERPNPEVKMWSFSE

Specific function: Unknown

COG id: COG5184

COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52496; Mature: 52496

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANRISWPMAVLAGMVVVQLAGCSDPKPTAVIESNNESLVQFDNGKLIQLKEKPSPQYR
CCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEECCCCCEEEECCCCEEEEECCCCCCCE
HIPCDLPTLASVIANNMAIAAITQNGDVITWGNSFSGGDSREVTDQLKDVIQIVPVKDGF
ECCCCHHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHEEECCCCCH
AALRKNGTVVYWGNAGKLSLDKALQNRMTNITKLFANQEAIAALDANGKVHTWGYGPYGG
HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCC
NSLHVQDQLIDVIDIVAAGRSFTALKKDGSTVIWGKIESSTNMKKLLPQLKDVVSVEYTH
CEEEEHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHEEEECC
GTFAALKKDGTVVTWGHSSDVYPIRGALQDVASITTNRCAFAILSPTGEAHFWGNSTNCG
CEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCC
IDWLKQTGIKGVSSIVSVDTGFLLLRDNAVPQIIVDDTDYAYLYGFHYAQDILNQYWQEG
HHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCC
SRIISGQASFVFIRPDGKVVPVGYRANLENVQKLIASIPRLTWLGATDDGYVGLSEKGEW
CEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCE
VSWSMNTDTFATSSVKVADSLVIKPLDFSAPTQCETQEQRQDILSKERPNPEVKMWSFSE
EEEECCCCCEECCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure
MRANRISWPMAVLAGMVVVQLAGCSDPKPTAVIESNNESLVQFDNGKLIQLKEKPSPQYR
CCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEECCCCCEEEECCCCEEEEECCCCCCCE
HIPCDLPTLASVIANNMAIAAITQNGDVITWGNSFSGGDSREVTDQLKDVIQIVPVKDGF
ECCCCHHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHEEECCCCCH
AALRKNGTVVYWGNAGKLSLDKALQNRMTNITKLFANQEAIAALDANGKVHTWGYGPYGG
HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCC
NSLHVQDQLIDVIDIVAAGRSFTALKKDGSTVIWGKIESSTNMKKLLPQLKDVVSVEYTH
CEEEEHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHEEEECC
GTFAALKKDGTVVTWGHSSDVYPIRGALQDVASITTNRCAFAILSPTGEAHFWGNSTNCG
CEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCC
IDWLKQTGIKGVSSIVSVDTGFLLLRDNAVPQIIVDDTDYAYLYGFHYAQDILNQYWQEG
HHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCC
SRIISGQASFVFIRPDGKVVPVGYRANLENVQKLIASIPRLTWLGATDDGYVGLSEKGEW
CEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCE
VSWSMNTDTFATSSVKVADSLVIKPLDFSAPTQCETQEQRQDILSKERPNPEVKMWSFSE
EEEECCCCCEECCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA