Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597519

Identifier: 120597519

GI number: 120597519

Start: 766404

End: 768227

Strand: Direct

Name: 120597519

Synonym: Sputw3181_0688

Alternate gene names: NA

Gene position: 766404-768227 (Clockwise)

Preceding gene: 120597518

Following gene: 120597520

Centisome position: 16.28

GC content: 44.96

Gene sequence:

>1824_bases
ATGGGTGTCAGATTAGTACTTAAATTAGTACCTAGATTAGTAACGAGATTGACTCCACTAGGCTTAGGCCTGACTGTGCT
TGGGTGCGCCTTAGTGGGGAGCTTTTATTCCCCTCAGTCCTTTGCCTCTATTTGGGATTTATTTACCAATAAGCGAGGAG
TGAGTCAGACAAGTGTCCCCAAGGACAGCCCTCGTATTGAGCTCGTTGGCTCGCTTCCCGCTGATACTGAGCTAGAGCTT
ATCGGTTTTTATTATTCATCAATTTGCACCGAGAAAGAGATGTATTTCCCCAGTGGTGATATCGCTAATCCCCAGTGGCG
CACCAAAGGTACGACTTCTCAATTGCGGCAAGTGGTCACCAGTTTGCACAGTGCCAGTCATTTTACCCAATCTGTTGCGT
TGCAGGGCGGAGGGTCATGTGAGTGGCAGCTGACTAACATTCAATTGAATATGTCACTTCTGCCCAGTCATCGCTTGTGG
CAGGAAGCGCAATCCTTGGAAAAGCAGTATTTAGCTGAGTTACCTGTCGCCAAGGTGAAAGATGAAGCCCTTGAAAAAGA
TGCTTTTAAGCAGTCTTTTGACTTGATACCCACCTTAAAGGAAGCTGATGCGGCCAGCGTTGATAGCAATGACGCCACTA
TCTCCTTTTCACCAATTTATTATCCTATTTACAGTTATGCCCCCGAGGATAAGCAGCCCTTTGATGTTGGGCTGAAAAGC
AGTTTGCAGCGCGAGGTTTCTGACCGATGGAGTTTGCAACACTCGAGGCGTATCCGTTTAACCGATGAACGGGTAACACG
GGTGAATTTTACCCCTCACATTGCTGAAGATTATGCTGTGAATATCCATATCTTGGACAGAAAAGCCAAGGTAAGTTATC
CCGATGGCACCGAGTTTACCTACATCAAGGCCGATTTACGGCTTTATCCTTACGATTCTGCAAAATCCCGCTTCAACAGC
TTACAGCGCAGTGCGCGTCTTGAAGATAAAAGACAGTTAGCCAAGATTTACGATTCAGGCATTGAGCATGTGTTTAAAGG
GGATAAAGCCAAGGCTGAAGTCTTGTATCGCGAATTGGGTGAGGCAGGGGATATGGAATCAATCAACTGGCTTAGAGAAC
GGGCTCGTTGGGGCTACATTAAAGATGGCCAGTACTGGTTAGAGCGCGCTGCTAAGCTTGGCGATATTCAAGCTCAACTG
GAGTTAATTAATCAACCCTTATCCGTCATTCCTCTGGGTAAAGTGAATACTGGCCAAGCAAAAATCCGTGAGCAGCAAGC
ATGGCAAGCGTTAACTGAACTGACTAAGCAGGGAATACCTCAAGCCGTCAGCACGATGGCGTATTATCAAGTGTTTTCTT
GCTCGCCCTATTTTGATACCACCGCAGCGCTGGATAATTATCGTAAAAGTGTTAAAACTCAACCTGATTTAGCCCAGGGC
GCTGCTGAAACCTATTATTACTTTAAAGAGGATTTTAAACAGGCCGAGGAGTTTTGGGATATTGCCGCTGAGCAGGATCT
ATATAGTGCTGCTGAATTTGCCAATATTTTAATGACAGATAAATATAAAAATGTGGCTAAAGCACGATATTTACTAGAGA
AAGTCGCTAATTACGGTGCTGAACAAGGTCTTCAAAATAACATTATGGGTACGGCGTATTTTCAATTGGCGACCTTACTT
GAGAATGCAGATAGTGGGGATAAAGATCTTGGTCGTGCGCTCGCCCTTTACCAGATGAGTATTGATCTTGCTGCAGGTTT
TTCAAATGATTATGAAACTCAAGCTAAGGCGAGAGTGCAAGCACTACAAAATTTATCGAGATAG

Upstream 100 bases:

>100_bases
TTCGCTGACCAGTTTTGAATTGAGTCGGCAATTGTGTAGACTCCGCTAGGTTTATGGCGTGAATAGCGTAAAGACTCATC
AGCAATGAAAGACTGGTATT

Downstream 100 bases:

>100_bases
CGAATAAAAGTGGTAATCGGGTTTGAAATTGCGCTAGCTTAGCCCCAATAACTTCCAGTCAGGTCTTTTGTATCGAATAA
ATATTGTTCCTCTCATTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MGVRLVLKLVPRLVTRLTPLGLGLTVLGCALVGSFYSPQSFASIWDLFTNKRGVSQTSVPKDSPRIELVGSLPADTELEL
IGFYYSSICTEKEMYFPSGDIANPQWRTKGTTSQLRQVVTSLHSASHFTQSVALQGGGSCEWQLTNIQLNMSLLPSHRLW
QEAQSLEKQYLAELPVAKVKDEALEKDAFKQSFDLIPTLKEADAASVDSNDATISFSPIYYPIYSYAPEDKQPFDVGLKS
SLQREVSDRWSLQHSRRIRLTDERVTRVNFTPHIAEDYAVNIHILDRKAKVSYPDGTEFTYIKADLRLYPYDSAKSRFNS
LQRSARLEDKRQLAKIYDSGIEHVFKGDKAKAEVLYRELGEAGDMESINWLRERARWGYIKDGQYWLERAAKLGDIQAQL
ELINQPLSVIPLGKVNTGQAKIREQQAWQALTELTKQGIPQAVSTMAYYQVFSCSPYFDTTAALDNYRKSVKTQPDLAQG
AAETYYYFKEDFKQAEEFWDIAAEQDLYSAAEFANILMTDKYKNVAKARYLLEKVANYGAEQGLQNNIMGTAYFQLATLL
ENADSGDKDLGRALALYQMSIDLAAGFSNDYETQAKARVQALQNLSR

Sequences:

>Translated_607_residues
MGVRLVLKLVPRLVTRLTPLGLGLTVLGCALVGSFYSPQSFASIWDLFTNKRGVSQTSVPKDSPRIELVGSLPADTELEL
IGFYYSSICTEKEMYFPSGDIANPQWRTKGTTSQLRQVVTSLHSASHFTQSVALQGGGSCEWQLTNIQLNMSLLPSHRLW
QEAQSLEKQYLAELPVAKVKDEALEKDAFKQSFDLIPTLKEADAASVDSNDATISFSPIYYPIYSYAPEDKQPFDVGLKS
SLQREVSDRWSLQHSRRIRLTDERVTRVNFTPHIAEDYAVNIHILDRKAKVSYPDGTEFTYIKADLRLYPYDSAKSRFNS
LQRSARLEDKRQLAKIYDSGIEHVFKGDKAKAEVLYRELGEAGDMESINWLRERARWGYIKDGQYWLERAAKLGDIQAQL
ELINQPLSVIPLGKVNTGQAKIREQQAWQALTELTKQGIPQAVSTMAYYQVFSCSPYFDTTAALDNYRKSVKTQPDLAQG
AAETYYYFKEDFKQAEEFWDIAAEQDLYSAAEFANILMTDKYKNVAKARYLLEKVANYGAEQGLQNNIMGTAYFQLATLL
ENADSGDKDLGRALALYQMSIDLAAGFSNDYETQAKARVQALQNLSR
>Mature_606_residues
GVRLVLKLVPRLVTRLTPLGLGLTVLGCALVGSFYSPQSFASIWDLFTNKRGVSQTSVPKDSPRIELVGSLPADTELELI
GFYYSSICTEKEMYFPSGDIANPQWRTKGTTSQLRQVVTSLHSASHFTQSVALQGGGSCEWQLTNIQLNMSLLPSHRLWQ
EAQSLEKQYLAELPVAKVKDEALEKDAFKQSFDLIPTLKEADAASVDSNDATISFSPIYYPIYSYAPEDKQPFDVGLKSS
LQREVSDRWSLQHSRRIRLTDERVTRVNFTPHIAEDYAVNIHILDRKAKVSYPDGTEFTYIKADLRLYPYDSAKSRFNSL
QRSARLEDKRQLAKIYDSGIEHVFKGDKAKAEVLYRELGEAGDMESINWLRERARWGYIKDGQYWLERAAKLGDIQAQLE
LINQPLSVIPLGKVNTGQAKIREQQAWQALTELTKQGIPQAVSTMAYYQVFSCSPYFDTTAALDNYRKSVKTQPDLAQGA
AETYYYFKEDFKQAEEFWDIAAEQDLYSAAEFANILMTDKYKNVAKARYLLEKVANYGAEQGLQNNIMGTAYFQLATLLE
NADSGDKDLGRALALYQMSIDLAAGFSNDYETQAKARVQALQNLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68524; Mature: 68393

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRLVLKLVPRLVTRLTPLGLGLTVLGCALVGSFYSPQSFASIWDLFTNKRGVSQTSVP
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
KDSPRIELVGSLPADTELELIGFYYSSICTEKEMYFPSGDIANPQWRTKGTTSQLRQVVT
CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SLHSASHFTQSVALQGGGSCEWQLTNIQLNMSLLPSHRLWQEAQSLEKQYLAELPVAKVK
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHH
DEALEKDAFKQSFDLIPTLKEADAASVDSNDATISFSPIYYPIYSYAPEDKQPFDVGLKS
HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEECCEEEEHHCCCCCCCCCCHHHHHH
SLQREVSDRWSLQHSRRIRLTDERVTRVNFTPHIAEDYAVNIHILDRKAKVSYPDGTEFT
HHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEE
YIKADLRLYPYDSAKSRFNSLQRSARLEDKRQLAKIYDSGIEHVFKGDKAKAEVLYRELG
EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
EAGDMESINWLRERARWGYIKDGQYWLERAAKLGDIQAQLELINQPLSVIPLGKVNTGQA
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHH
KIREQQAWQALTELTKQGIPQAVSTMAYYQVFSCSPYFDTTAALDNYRKSVKTQPDLAQG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH
AAETYYYFKEDFKQAEEFWDIAAEQDLYSAAEFANILMTDKYKNVAKARYLLEKVANYGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQGLQNNIMGTAYFQLATLLENADSGDKDLGRALALYQMSIDLAAGFSNDYETQAKARVQ
HCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ALQNLSR
HHHHCCC
>Mature Secondary Structure 
GVRLVLKLVPRLVTRLTPLGLGLTVLGCALVGSFYSPQSFASIWDLFTNKRGVSQTSVP
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
KDSPRIELVGSLPADTELELIGFYYSSICTEKEMYFPSGDIANPQWRTKGTTSQLRQVVT
CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SLHSASHFTQSVALQGGGSCEWQLTNIQLNMSLLPSHRLWQEAQSLEKQYLAELPVAKVK
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHH
DEALEKDAFKQSFDLIPTLKEADAASVDSNDATISFSPIYYPIYSYAPEDKQPFDVGLKS
HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEECCEEEEHHCCCCCCCCCCHHHHHH
SLQREVSDRWSLQHSRRIRLTDERVTRVNFTPHIAEDYAVNIHILDRKAKVSYPDGTEFT
HHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEE
YIKADLRLYPYDSAKSRFNSLQRSARLEDKRQLAKIYDSGIEHVFKGDKAKAEVLYRELG
EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
EAGDMESINWLRERARWGYIKDGQYWLERAAKLGDIQAQLELINQPLSVIPLGKVNTGQA
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHH
KIREQQAWQALTELTKQGIPQAVSTMAYYQVFSCSPYFDTTAALDNYRKSVKTQPDLAQG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH
AAETYYYFKEDFKQAEEFWDIAAEQDLYSAAEFANILMTDKYKNVAKARYLLEKVANYGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQGLQNNIMGTAYFQLATLLENADSGDKDLGRALALYQMSIDLAAGFSNDYETQAKARVQ
HCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ALQNLSR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA