Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yvbK [H]

Identifier: 120597512

GI number: 120597512

Start: 753335

End: 754033

Strand: Direct

Name: yvbK [H]

Synonym: Sputw3181_0681

Alternate gene names: 120597512

Gene position: 753335-754033 (Clockwise)

Preceding gene: 120597511

Following gene: 120597514

Centisome position: 16.0

GC content: 39.34

Gene sequence:

>699_bases
ATGTTAGAACTGTTGACTCCTTTAAAGAAGACTGTAAATCAGTCTGCAAAAGATGACCTAGAGTACTGGCTAAGTTCCAT
GCCTGACAGGGCTGCTTGGTATGTTATTTCGGATTATTGTTTCGGGGACAAAACTAAGCAAAATGACACAGTGTCATTTA
CAGTTCTATTAAACTGCGATGTGGTTATAGTTATTATTGAGTTTGGTGGTAGTGTTTCCCGTCCCTTAGGCGTTTTGTGC
TTTGAGGTAAAAATGGAATATTTAGAAGTCGAATCAACAGAAATTCCTATCCAGCTTTTGCTTGAAGCCGATCCCTCGGA
GCAAAGCATTCGCTCATATCTAAGTGATTCGTGGTGCTACGTAGCGAAGAATAATGGACAGATTGTCGGTGCTTGTATTG
CCAAATTAATCTGTGCTAGCACAGCAGAGATATTTAACATTGCAGTCTATCCTGACCATCAGCAGCAAGGTATTGGTTCT
GGTTTAATAAAGCTTGCTTTGAACGAGTTAGCTAACAAAAAAATACATAGAGTGGAGTTGGGTACAGGTACGTTCGGTTA
TCAACTGACATATTATCAGCGCATAGGTTTTCGAGTTGACTCTGTTGTGAAAGAGCATTTCTTAGCAAATTATCCGGAAC
CCATTTTTGAAAACGGTATACAGCACAAAGATATGCTAAGGTTGTACATCGAATTTTAA

Upstream 100 bases:

>100_bases
AAACAGCCACAACCCCAAAATCACTTGGTTGCGAAACAGGATAAAAGCGATTTATCAGCCGCGTGCGCATGATTAAGACG
TTAAGCTTCACAGAGGATAT

Downstream 100 bases:

>100_bases
CCACGTAGATAAACGACTTTAAAAGGGACTGTCCACGAGTGGAGTTTCCAGTCCCATTGAACTGCGATGTGGTTACGGCT
GTTGTGATTGAGTTTGGTGG

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLELLTPLKKTVNQSAKDDLEYWLSSMPDRAAWYVISDYCFGDKTKQNDTVSFTVLLNCDVVIVIIEFGGSVSRPLGVLC
FEVKMEYLEVESTEIPIQLLLEADPSEQSIRSYLSDSWCYVAKNNGQIVGACIAKLICASTAEIFNIAVYPDHQQQGIGS
GLIKLALNELANKKIHRVELGTGTFGYQLTYYQRIGFRVDSVVKEHFLANYPEPIFENGIQHKDMLRLYIEF

Sequences:

>Translated_232_residues
MLELLTPLKKTVNQSAKDDLEYWLSSMPDRAAWYVISDYCFGDKTKQNDTVSFTVLLNCDVVIVIIEFGGSVSRPLGVLC
FEVKMEYLEVESTEIPIQLLLEADPSEQSIRSYLSDSWCYVAKNNGQIVGACIAKLICASTAEIFNIAVYPDHQQQGIGS
GLIKLALNELANKKIHRVELGTGTFGYQLTYYQRIGFRVDSVVKEHFLANYPEPIFENGIQHKDMLRLYIEF
>Mature_232_residues
MLELLTPLKKTVNQSAKDDLEYWLSSMPDRAAWYVISDYCFGDKTKQNDTVSFTVLLNCDVVIVIIEFGGSVSRPLGVLC
FEVKMEYLEVESTEIPIQLLLEADPSEQSIRSYLSDSWCYVAKNNGQIVGACIAKLICASTAEIFNIAVYPDHQQQGIGS
GLIKLALNELANKKIHRVELGTGTFGYQLTYYQRIGFRVDSVVKEHFLANYPEPIFENGIQHKDMLRLYIEF

Specific function: Probable N-acetyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 26252; Mature: 26252

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLTPLKKTVNQSAKDDLEYWLSSMPDRAAWYVISDYCFGDKTKQNDTVSFTVLLNCD
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECC
VVIVIIEFGGSVSRPLGVLCFEVKMEYLEVESTEIPIQLLLEADPSEQSIRSYLSDSWCY
EEEEEEECCCCCCCCHHHHHHEEEHHHHEECCCCCCEEEEEECCCCHHHHHHHHCCCEEE
VAKNNGQIVGACIAKLICASTAEIFNIAVYPDHQQQGIGSGLIKLALNELANKKIHRVEL
EECCCCEEHHHHHHHHHHHCCHHHEEEEECCCHHHCCCHHHHHHHHHHHHCCCCEEEEEE
GTGTFGYQLTYYQRIGFRVDSVVKEHFLANYPEPIFENGIQHKDMLRLYIEF
CCCCCCEEEEEEHHHCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHEEEECC
>Mature Secondary Structure
MLELLTPLKKTVNQSAKDDLEYWLSSMPDRAAWYVISDYCFGDKTKQNDTVSFTVLLNCD
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECC
VVIVIIEFGGSVSRPLGVLCFEVKMEYLEVESTEIPIQLLLEADPSEQSIRSYLSDSWCY
EEEEEEECCCCCCCCHHHHHHEEEHHHHEECCCCCCEEEEEECCCCHHHHHHHHCCCEEE
VAKNNGQIVGACIAKLICASTAEIFNIAVYPDHQQQGIGSGLIKLALNELANKKIHRVEL
EECCCCEEHHHHHHHHHHHCCHHHEEEEECCCHHHCCCHHHHHHHHHHHHCCCCEEEEEE
GTGTFGYQLTYYQRIGFRVDSVVKEHFLANYPEPIFENGIQHKDMLRLYIEF
CCCCCCEEEEEEHHHCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]