Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597514

Identifier: 120597514

GI number: 120597514

Start: 757238

End: 758608

Strand: Direct

Name: 120597514

Synonym: Sputw3181_0683

Alternate gene names: NA

Gene position: 757238-758608 (Clockwise)

Preceding gene: 120597512

Following gene: 120597516

Centisome position: 16.08

GC content: 42.96

Gene sequence:

>1371_bases
ATGATAAAAAGTAAATTAAAGGAATGGGTTGCTGTTACCGTGGCGTGTTTAGCCGTTACGGCATGTGGATCAGATGATAA
GGATGAAGGGAGTTCTGAACAAAACACCACTTATGTGCAATTCTACAATGCTTCTGCTAGAAGTACCGCAACGGCGCTCA
AAGTTGCCGACAAAACCTATGAAAGTGTGATCTATGGTGATGCGATGCCCCGTTTTACGTCGACAGTTGGAGTATCTGCA
ATTGAGGTGATGGGGAAAGACGCCTCCAATAAAGAGATTTCTATTTACAAAGAGAATATTGAATTAAAAGCGGCAACGGA
TCACTTCTTTGTATTACATGGTGATTTTGCCGAACCTAAATTACTTAATATCAACTATTCTCGCACTGAACTCGATAAGC
TCAACGAAGTGGCTGAAAACAGTAAAATGCAGCTCTTGATTGCCAATACCGCTGTACATGCCCAAGCCTTTGACGCCTAT
GTTGCTAAGTCGACCCAAACCTTTGCCGATGCCGTGATGTTAGGTAGTGTGGCTTATGGTGAAGTGTCGCAGCCGCAAAT
GATGGATACAGGTGAATATAAGGTTTATCTCACACCCGCGGGAACAACCAATGTTGCTTATACAACGGCTAACATTAAAT
TCAGTTCAAAGGTGCCCTATAAGTTGATTATCCGCGAAGGTTTTGGTGCTTCGGATGCCAAAATCACCTTAGACAGTGTC
GATTCAACTACCAATGTTCGCAATCATGTGGCATTAGAAGCGAGTGTCGATTATCGCGTCTTTAACGGTTTAGGCTCGCA
TATTATTGATGTGAAAGTCGCCAGCAGTAAGCAAGAAACCCTGTTTAGCGAAGTGCCATCTTTTGGGGTGACTAGCTATC
AAGGTGCTGAGTTTAATGATTTTGGTGTGAGTGTGTTCGACCACGGTACGCAAACTAAATTACTCGATAATGTGCTTATC
ACCCTTAACCAAGATGACATTAAAACCATCTTCATCTATGAGCAAACGAATGAGCAGGGCAGCCAAGTGAAGGCGATAGA
GATGAAGCAAACTCAGACGCCAAATCCCTATAGCGTGAAGTTCGATATTGTGAGTTTTGCCGATAAAAGCAATCTAACCG
TGTATTTTTTAAAGGCGAATGACACGATTGAAACGGCTGCAAATAAGATCACTGCGGTCAATCCAGCGAGCCCTCAGTCA
TTGACTGTGCCTGCTGGCGAATATTCCATTAAGGTCATCGCCGTGGAAAACGGTACTAAAACCGTTGTCTATGCATCCGA
CTTAATGGATTTCAGCAATGAAGACAATGTGACTATGGTGCTGAATAAAGATCCTTCTACCAGCTTTGGTTATAACCTCA
TTAAGCTGTAA

Upstream 100 bases:

>100_bases
TGTGAAAAAATTGTTCTTATTTTTATATCTATCAGCCATTGTTGTGGCGCTATATCTGCGTAGACTAAACCTGATTTTTC
GTCAGTCTATGAGGGATATA

Downstream 100 bases:

>100_bases
TTACTCACATAAGGTTATTAAGCAAATAAAAAAAGCGCTATCTAGGTCCTAGGTAGCGCTTTTTATTAATCCAGTGTTTA
TATTACTCGGATAGCTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MIKSKLKEWVAVTVACLAVTACGSDDKDEGSSEQNTTYVQFYNASARSTATALKVADKTYESVIYGDAMPRFTSTVGVSA
IEVMGKDASNKEISIYKENIELKAATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY
VAKSTQTFADAVMLGSVAYGEVSQPQMMDTGEYKVYLTPAGTTNVAYTTANIKFSSKVPYKLIIREGFGASDAKITLDSV
DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTSYQGAEFNDFGVSVFDHGTQTKLLDNVLI
TLNQDDIKTIFIYEQTNEQGSQVKAIEMKQTQTPNPYSVKFDIVSFADKSNLTVYFLKANDTIETAANKITAVNPASPQS
LTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPSTSFGYNLIKL

Sequences:

>Translated_456_residues
MIKSKLKEWVAVTVACLAVTACGSDDKDEGSSEQNTTYVQFYNASARSTATALKVADKTYESVIYGDAMPRFTSTVGVSA
IEVMGKDASNKEISIYKENIELKAATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY
VAKSTQTFADAVMLGSVAYGEVSQPQMMDTGEYKVYLTPAGTTNVAYTTANIKFSSKVPYKLIIREGFGASDAKITLDSV
DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTSYQGAEFNDFGVSVFDHGTQTKLLDNVLI
TLNQDDIKTIFIYEQTNEQGSQVKAIEMKQTQTPNPYSVKFDIVSFADKSNLTVYFLKANDTIETAANKITAVNPASPQS
LTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPSTSFGYNLIKL
>Mature_456_residues
MIKSKLKEWVAVTVACLAVTACGSDDKDEGSSEQNTTYVQFYNASARSTATALKVADKTYESVIYGDAMPRFTSTVGVSA
IEVMGKDASNKEISIYKENIELKAATDHFFVLHGDFAEPKLLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAY
VAKSTQTFADAVMLGSVAYGEVSQPQMMDTGEYKVYLTPAGTTNVAYTTANIKFSSKVPYKLIIREGFGASDAKITLDSV
DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTSYQGAEFNDFGVSVFDHGTQTKLLDNVLI
TLNQDDIKTIFIYEQTNEQGSQVKAIEMKQTQTPNPYSVKFDIVSFADKSNLTVYFLKANDTIETAANKITAVNPASPQS
LTVPAGEYSIKVIAVENGTKTVVYASDLMDFSNEDNVTMVLNKDPSTSFGYNLIKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49783; Mature: 49783

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSKLKEWVAVTVACLAVTACGSDDKDEGSSEQNTTYVQFYNASARSTATALKVADKTY
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEEEHHHHH
ESVIYGDAMPRFTSTVGVSAIEVMGKDASNKEISIYKENIELKAATDHFFVLHGDFAEPK
HHEEECCCCCCHHHHCCCEEEEEECCCCCCCEEEEEEECEEEEEECCEEEEEECCCCCCE
LLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAYVAKSTQTFADAVMLGSVAYG
EEEEECCHHHHHHHHHHHCCCCEEEEEEECEEEHHHHHHHHHCCHHHHHHHHHCCCEECC
EVSQPQMMDTGEYKVYLTPAGTTNVAYTTANIKFSSKVPYKLIIREGFGASDAKITLDSV
CCCCCCEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECC
DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTSYQGAEFND
CCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCC
FGVSVFDHGTQTKLLDNVLITLNQDDIKTIFIYEQTNEQGSQVKAIEMKQTQTPNPYSVK
CCEEEECCCCHHHEECEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEE
FDIVSFADKSNLTVYFLKANDTIETAANKITAVNPASPQSLTVPAGEYSIKVIAVENGTK
EEEEEECCCCCCEEEEEECCCCHHHHCCEEEEECCCCCCEEEECCCCEEEEEEEEECCCE
TVVYASDLMDFSNEDNVTMVLNKDPSTSFGYNLIKL
EEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MIKSKLKEWVAVTVACLAVTACGSDDKDEGSSEQNTTYVQFYNASARSTATALKVADKTY
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEEEHHHHH
ESVIYGDAMPRFTSTVGVSAIEVMGKDASNKEISIYKENIELKAATDHFFVLHGDFAEPK
HHEEECCCCCCHHHHCCCEEEEEECCCCCCCEEEEEEECEEEEEECCEEEEEECCCCCCE
LLNINYSRTELDKLNEVAENSKMQLLIANTAVHAQAFDAYVAKSTQTFADAVMLGSVAYG
EEEEECCHHHHHHHHHHHCCCCEEEEEEECEEEHHHHHHHHHCCHHHHHHHHHCCCEECC
EVSQPQMMDTGEYKVYLTPAGTTNVAYTTANIKFSSKVPYKLIIREGFGASDAKITLDSV
CCCCCCEECCCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECC
DSTTNVRNHVALEASVDYRVFNGLGSHIIDVKVASSKQETLFSEVPSFGVTSYQGAEFND
CCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCC
FGVSVFDHGTQTKLLDNVLITLNQDDIKTIFIYEQTNEQGSQVKAIEMKQTQTPNPYSVK
CCEEEECCCCHHHEECEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEE
FDIVSFADKSNLTVYFLKANDTIETAANKITAVNPASPQSLTVPAGEYSIKVIAVENGTK
EEEEEECCCCCCEEEEEECCCCHHHHCCEEEEECCCCCCEEEECCCCEEEEEEEEECCCE
TVVYASDLMDFSNEDNVTMVLNKDPSTSFGYNLIKL
EEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA