| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597479
Identifier: 120597479
GI number: 120597479
Start: 712503
End: 712838
Strand: Direct
Name: 120597479
Synonym: Sputw3181_0648
Alternate gene names: NA
Gene position: 712503-712838 (Clockwise)
Preceding gene: 120597478
Following gene: 120597485
Centisome position: 15.13
GC content: 39.88
Gene sequence:
>336_bases ATGTTTGAACAGTTAGTCGCCATTATCGCCCAATTGGGTAATATGCTTCGCCCTTGGGCATTTGATATTGCCACCGCTAT GGTAGTGTGCCTGATTTTGGTGTTTTCCGCGGATGTAAACCGCATTTTAAGACGTCATCTCTTAGGATATTCTTTTGTAC TGCGCACTTTCGTCTTTATCATTCTAAACGCTTTTGGTTATGGTCTTTTAATCATAAAAACAACACCTTGGGTAGCTAGG CATATTGTTGCCATGCCACCACATTGGATGTTTCTATTAATTGTTTCTATGTTTATTTTTATCGGTTATTGGGCTCAGCG AAACAACCAAGCTTGA
Upstream 100 bases:
>100_bases GTGCCTCACAGCATCTCCCTTTATGCTTGTTATTGTTATTTTTCAATACACTGTCTTAGCCAGTATTATGGTTTGAGAAC AGCTTTCTAGGTTGAATATT
Downstream 100 bases:
>100_bases TCTTGTCACTGAAGCTTACTCAAAGTAGCCTTGGTAATTGAGCGAGGGTGTTTGAGTGAGAGCCTCCATAGCGCGATCGG GATAATTACTGAAAATACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MFEQLVAIIAQLGNMLRPWAFDIATAMVVCLILVFSADVNRILRRHLLGYSFVLRTFVFIILNAFGYGLLIIKTTPWVAR HIVAMPPHWMFLLIVSMFIFIGYWAQRNNQA
Sequences:
>Translated_111_residues MFEQLVAIIAQLGNMLRPWAFDIATAMVVCLILVFSADVNRILRRHLLGYSFVLRTFVFIILNAFGYGLLIIKTTPWVAR HIVAMPPHWMFLLIVSMFIFIGYWAQRNNQA >Mature_111_residues MFEQLVAIIAQLGNMLRPWAFDIATAMVVCLILVFSADVNRILRRHLLGYSFVLRTFVFIILNAFGYGLLIIKTTPWVAR HIVAMPPHWMFLLIVSMFIFIGYWAQRNNQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12858; Mature: 12858
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQLVAIIAQLGNMLRPWAFDIATAMVVCLILVFSADVNRILRRHLLGYSFVLRTFVFI CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNAFGYGLLIIKTTPWVARHIVAMPPHWMFLLIVSMFIFIGYWAQRNNQA HHHHHCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFEQLVAIIAQLGNMLRPWAFDIATAMVVCLILVFSADVNRILRRHLLGYSFVLRTFVFI CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNAFGYGLLIIKTTPWVARHIVAMPPHWMFLLIVSMFIFIGYWAQRNNQA HHHHHCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA