Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is nudH [C]

Identifier: 120597396

GI number: 120597396

Start: 618772

End: 619209

Strand: Direct

Name: nudH [C]

Synonym: Sputw3181_0565

Alternate gene names: 120597396

Gene position: 618772-619209 (Clockwise)

Preceding gene: 120597390

Following gene: 120597399

Centisome position: 13.14

GC content: 48.4

Gene sequence:

>438_bases
GTGGCCTTTAACGATACCTTTAGATTGAGCAGCCACGCGGTTATTACCAATGCGCTGGGACAAGTGCTGTTGCTTAAGGC
CAATTACGGTAATTTTGCTTGGGGTTTACCCGGCGGCGCACTCGAACCAGGCGAAACGATTCACGAGGCCTTGGTGCGTG
AATGCCAAGAGGAATTAGGCTTAAGTGTGCGGGTGAACTATTTGAGCGGTGTGTATTATCACAGCGCTTATCAGTCCCAA
GCCTTTATTTTTCGATGCGAATTACTGTTGCCTGAAGTGGCAAAAGATGGGGTAGAAGACGAGCTATTGCCGATCCAATT
AAGTCACGAACACTCAGCGTTCGCCTTCCACGATATCGACACCCTTAGCACGGTTCAGCAGCAAAGAATTAAAGATTGCC
TCAATTTCAACGGGGTTGTGGTGAGTGCCAAGTTCTAA

Upstream 100 bases:

>100_bases
GCTATAAGCGGTTTAAGCAAAGAGTTAAGGAATGCGAAGCGTTGGCGTGACACAGAAAGAAGCTTCAATTCGTACCGAAC
AGACATGCAAGGATAATTGA

Downstream 100 bases:

>100_bases
TGCTTTGCCAGTAAACCGCCGGCTGTTAATCGGCTTGGGTTTGCGCGAGTAAAGTTTCTAAGCAGTGTTCCTTGATACCG
TAATAGGCTTTAATGTCTGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: MutT/Nudix Family Protein; MutT-Like Protein

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAFNDTFRLSSHAVITNALGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELGLSVRVNYLSGVYYHSAYQSQ
AFIFRCELLLPEVAKDGVEDELLPIQLSHEHSAFAFHDIDTLSTVQQQRIKDCLNFNGVVVSAKF

Sequences:

>Translated_145_residues
MAFNDTFRLSSHAVITNALGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELGLSVRVNYLSGVYYHSAYQSQ
AFIFRCELLLPEVAKDGVEDELLPIQLSHEHSAFAFHDIDTLSTVQQQRIKDCLNFNGVVVSAKF
>Mature_144_residues
AFNDTFRLSSHAVITNALGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELGLSVRVNYLSGVYYHSAYQSQA
FIFRCELLLPEVAKDGVEDELLPIQLSHEHSAFAFHDIDTLSTVQQQRIKDCLNFNGVVVSAKF

Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 16114; Mature: 15983

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNDTFRLSSHAVITNALGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELG
CCCCCCEECCCCHHHHHHCCEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCC
LSVRVNYLSGVYYHSAYQSQAFIFRCELLLPEVAKDGVEDELLPIQLSHEHSAFAFHDID
CEEEEEEHHCCHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECHH
TLSTVQQQRIKDCLNFNGVVVSAKF
HHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure 
AFNDTFRLSSHAVITNALGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELG
CCCCCEECCCCHHHHHHCCEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCC
LSVRVNYLSGVYYHSAYQSQAFIFRCELLLPEVAKDGVEDELLPIQLSHEHSAFAFHDID
CEEEEEEHHCCHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECHH
TLSTVQQQRIKDCLNFNGVVVSAKF
HHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA