Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is fliE [H]

Identifier: 120597293

GI number: 120597293

Start: 507196

End: 507534

Strand: Direct

Name: fliE [H]

Synonym: Sputw3181_0462

Alternate gene names: 120597293

Gene position: 507196-507534 (Clockwise)

Preceding gene: 120597292

Following gene: 120597294

Centisome position: 10.77

GC content: 44.25

Gene sequence:

>339_bases
ATGTCTTCTGGAGCGATAGTTAGCTCGAATATGCTAATGGACACCTTAAGTATTCATCGGGAAGTGGCTAAAGGAGCGAT
CAATATCTCCCCTAACCCCGCCGATAATGGTCAGGCTTATGGCTCATTTACGGACTTGATAAAGAGTAAGGTGGCTGCCG
TTAACCAAGATCAGAATCAATCCTCTATGGCGATGACTGCGGTTGATAGTGGAAAGAGTGATGATCTTGTCGGTGCTATG
GTGGCTTCGCAAAAAGCCAGTTTGTCCTTTGCGACTATGCTTCAAATTCGTAATCGTCTTGTGCAAGCATTTGACGATGT
AATGAAGATGCCTATTTAA

Upstream 100 bases:

>100_bases
ATCGACTCGTACAAATGCGGGAAGCAGGGATTGATATTGAAATGTTATTAGAACAAGCGGGCCGCGCTGCTTAGCGTGAT
ACAAAGTAATAGGAAAAAAT

Downstream 100 bases:

>100_bases
GGAATTGTGTGAATGTCTACCACTTTTGTTCAATCAGGTCAGGATATTACGGGAACTGAGCGTTCGTCAGGCCTCATTGC
TGATATGACCCAGAAATGGC

Product: flagellar hook-basal body complex subunit FliE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGAM
VASQKASLSFATMLQIRNRLVQAFDDVMKMPI

Sequences:

>Translated_112_residues
MSSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGAM
VASQKASLSFATMLQIRNRLVQAFDDVMKMPI
>Mature_111_residues
SSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGAMV
ASQKASLSFATMLQIRNRLVQAFDDVMKMPI

Specific function: Unknown

COG id: COG1677

COG function: function code NU; Flagellar hook-basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001624 [H]

Pfam domain/function: PF02049 FliE [H]

EC number: NA

Molecular weight: Translated: 11855; Mature: 11723

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQ
CCCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
SSMAMTAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI
CHHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQ
CCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
SSMAMTAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI
CHHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA