| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fliE [H]
Identifier: 120597293
GI number: 120597293
Start: 507196
End: 507534
Strand: Direct
Name: fliE [H]
Synonym: Sputw3181_0462
Alternate gene names: 120597293
Gene position: 507196-507534 (Clockwise)
Preceding gene: 120597292
Following gene: 120597294
Centisome position: 10.77
GC content: 44.25
Gene sequence:
>339_bases ATGTCTTCTGGAGCGATAGTTAGCTCGAATATGCTAATGGACACCTTAAGTATTCATCGGGAAGTGGCTAAAGGAGCGAT CAATATCTCCCCTAACCCCGCCGATAATGGTCAGGCTTATGGCTCATTTACGGACTTGATAAAGAGTAAGGTGGCTGCCG TTAACCAAGATCAGAATCAATCCTCTATGGCGATGACTGCGGTTGATAGTGGAAAGAGTGATGATCTTGTCGGTGCTATG GTGGCTTCGCAAAAAGCCAGTTTGTCCTTTGCGACTATGCTTCAAATTCGTAATCGTCTTGTGCAAGCATTTGACGATGT AATGAAGATGCCTATTTAA
Upstream 100 bases:
>100_bases ATCGACTCGTACAAATGCGGGAAGCAGGGATTGATATTGAAATGTTATTAGAACAAGCGGGCCGCGCTGCTTAGCGTGAT ACAAAGTAATAGGAAAAAAT
Downstream 100 bases:
>100_bases GGAATTGTGTGAATGTCTACCACTTTTGTTCAATCAGGTCAGGATATTACGGGAACTGAGCGTTCGTCAGGCCTCATTGC TGATATGACCCAGAAATGGC
Product: flagellar hook-basal body complex subunit FliE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGAM VASQKASLSFATMLQIRNRLVQAFDDVMKMPI
Sequences:
>Translated_112_residues MSSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGAM VASQKASLSFATMLQIRNRLVQAFDDVMKMPI >Mature_111_residues SSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQSSMAMTAVDSGKSDDLVGAMV ASQKASLSFATMLQIRNRLVQAFDDVMKMPI
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001624 [H]
Pfam domain/function: PF02049 FliE [H]
EC number: NA
Molecular weight: Translated: 11855; Mature: 11723
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQ CCCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC SSMAMTAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI CHHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSGAIVSSNMLMDTLSIHREVAKGAINISPNPADNGQAYGSFTDLIKSKVAAVNQDQNQ CCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC SSMAMTAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI CHHEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA