| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597243
Identifier: 120597243
GI number: 120597243
Start: 453943
End: 454203
Strand: Direct
Name: 120597243
Synonym: Sputw3181_0412
Alternate gene names: NA
Gene position: 453943-454203 (Clockwise)
Preceding gene: 120597241
Following gene: 120597245
Centisome position: 9.64
GC content: 39.46
Gene sequence:
>261_bases ATGAACACTCTTTCAGCCAATGAAGCAAAAATTCACTTTGGAGATTTGTTGCTCAAAGCTCAACAAGCTCCAATCCAAAT TAATAAAAATGGCAAGCCTGTGGCCGTTGTTATTTCAGCTGATGCATACCAAAGTATCGAGACACTAAAATTACATTTGC TTCAATCCAAAGCGGTGAAAGCCATAACTGACATCAAAATGGGCAATTTGGTTGATGGTAATACCTTTTTTGATGAGCTG GCCGCAGGGCAGTATGACTAA
Upstream 100 bases:
>100_bases AGCTATCAAATAGTATACATTTTGATAGGGTGCATTTTTGACTTTTATCGCCCAACTGGTGTAAATTGAGCGAATCGAAC GATTCGTTTAAAGGTGATAA
Downstream 100 bases:
>100_bases TGCCGGTAACTTATCATTTAACGCCCGATGCACAATCTGATCTGATAGGTATTCACCGCTTTACGTTAGCCCAATGGGGA ACGACTCAGTCGAAGACCTA
Product: prevent-host-death family protein
Products: NA
Alternate protein names: Antitoxin Module Of xin-Antitoxin System; Antitoxin Prevent-Host-Death Family Protein; Antitoxin Of xin-Antitoxin Stability System; Antitoxin Of xin-Antitoxin System Phd
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MNTLSANEAKIHFGDLLLKAQQAPIQINKNGKPVAVVISADAYQSIETLKLHLLQSKAVKAITDIKMGNLVDGNTFFDEL AAGQYD
Sequences:
>Translated_86_residues MNTLSANEAKIHFGDLLLKAQQAPIQINKNGKPVAVVISADAYQSIETLKLHLLQSKAVKAITDIKMGNLVDGNTFFDEL AAGQYD >Mature_86_residues MNTLSANEAKIHFGDLLLKAQQAPIQINKNGKPVAVVISADAYQSIETLKLHLLQSKAVKAITDIKMGNLVDGNTFFDEL AAGQYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9313; Mature: 9313
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLSANEAKIHFGDLLLKAQQAPIQINKNGKPVAVVISADAYQSIETLKLHLLQSKAVK CCCCCCCCCEEEHHHEEEECCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH AITDIKMGNLVDGNTFFDELAAGQYD HHHCCCCCCEECCCHHHHHHCCCCCC >Mature Secondary Structure MNTLSANEAKIHFGDLLLKAQQAPIQINKNGKPVAVVISADAYQSIETLKLHLLQSKAVK CCCCCCCCCEEEHHHEEEECCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH AITDIKMGNLVDGNTFFDELAAGQYD HHHCCCCCCEECCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA