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The map label for this gene is yebA [C]

Identifier: 120597228

GI number: 120597228

Start: 429469

End: 430368

Strand: Direct

Name: yebA [C]

Synonym: Sputw3181_0397

Alternate gene names: 120597228

Gene position: 429469-430368 (Clockwise)

Preceding gene: 120597226

Following gene: 120597229

Centisome position: 9.12

GC content: 44.44

Gene sequence:

>900_bases
ATGAGTGTAACAGTATTTATTCAAGGTCGGAATGGCGTCACACGCTGGCAACCCAGTAAACGTTGGTTGCTACTTCCTAT
ATTATTGTTGGCAACGGGGACGGGTATTTATCAGCACAACTCTGCTCGATTTGAAAATCAGCAAGCCAGTGTGGATAATG
ATCGTCTCGTACGCGAACAACAAAAGAAACAAGTCTTAGAGCTAAAAAGTGCCACCGAGTCTCAACTAGCCATGCTAGCG
ACTCATGTTGCACGTATGCAAGCCAAAATCACCCGTCTCGAAGCTTTAGGCCAACAGGTTGCCCAACAGAATAAACTGGC
TGAGGATTTTGATTTTTCCTCAGAAGTTGGGGTGGGCGGATTAAGCGAGTTAGGCACCAATATCGAGCTTGGTCAGCTTA
TCGATGATATGGATAAGTTGGCTTCACGAATTGACAACAATAATGTTCAACTTTCACTACTTGAAACTGTGTCATCTAAC
CACCATATAGATGATGAGCGTTATATATCAGGTATCCCACTCGATAAAGGTTGGTTATCGTCGCCTTATGGATTGCGTAA
TGATCCTTTTAATGGTCGCAGATCTGTGCACAAAGGAATTGATTTTACGGGTCGAGAAGGTGCTAAAGTCGTGGCGACTG
CTGCTGGTGTGGTGACTTGGGCTGGGAATATGTTTGGTTATGGCGAATTAGTTGAAATTGATCATGGTAATGGTTTTCGA
ACTCGTTATGGCCATAATAAAGCTTTGTCAGTGACTGTAGGTGATGTAGTCGCAAAGGGCGATACTATCGCCAGTATGGG
AAGCACTGGGCGCTCTACTGGTGCTCATGTGCATTATGAAGTGTTGCGTGGCGGACAACAGATAGATCCACAAAAGTTTG
TCTACCGCAAAGCAAGTTAA

Upstream 100 bases:

>100_bases
CTTTCTCAGCGATGTCAGGTAATTTACCTGATTGATGTAGTAATTGGCTGAGATCTTGAGGGGGCTTTTTCATATGATAA
TAAGATGGCTGAATTAGGCT

Downstream 100 bases:

>100_bases
TTGAAACATTGGCTTCTAGTTTCCATCATGGACTTGGCCTACAGAGAATAAGTGATTCAGATGTTTGGTAAATTACTGAC
AAAAGTATTTGGTAGCCGTA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSVTVFIQGRNGVTRWQPSKRWLLLPILLLATGTGIYQHNSARFENQQASVDNDRLVREQQKKQVLELKSATESQLAMLA
THVARMQAKITRLEALGQQVAQQNKLAEDFDFSSEVGVGGLSELGTNIELGQLIDDMDKLASRIDNNNVQLSLLETVSSN
HHIDDERYISGIPLDKGWLSSPYGLRNDPFNGRRSVHKGIDFTGREGAKVVATAAGVVTWAGNMFGYGELVEIDHGNGFR
TRYGHNKALSVTVGDVVAKGDTIASMGSTGRSTGAHVHYEVLRGGQQIDPQKFVYRKAS

Sequences:

>Translated_299_residues
MSVTVFIQGRNGVTRWQPSKRWLLLPILLLATGTGIYQHNSARFENQQASVDNDRLVREQQKKQVLELKSATESQLAMLA
THVARMQAKITRLEALGQQVAQQNKLAEDFDFSSEVGVGGLSELGTNIELGQLIDDMDKLASRIDNNNVQLSLLETVSSN
HHIDDERYISGIPLDKGWLSSPYGLRNDPFNGRRSVHKGIDFTGREGAKVVATAAGVVTWAGNMFGYGELVEIDHGNGFR
TRYGHNKALSVTVGDVVAKGDTIASMGSTGRSTGAHVHYEVLRGGQQIDPQKFVYRKAS
>Mature_298_residues
SVTVFIQGRNGVTRWQPSKRWLLLPILLLATGTGIYQHNSARFENQQASVDNDRLVREQQKKQVLELKSATESQLAMLAT
HVARMQAKITRLEALGQQVAQQNKLAEDFDFSSEVGVGGLSELGTNIELGQLIDDMDKLASRIDNNNVQLSLLETVSSNH
HIDDERYISGIPLDKGWLSSPYGLRNDPFNGRRSVHKGIDFTGREGAKVVATAAGVVTWAGNMFGYGELVEIDHGNGFRT
RYGHNKALSVTVGDVVAKGDTIASMGSTGRSTGAHVHYEVLRGGQQIDPQKFVYRKAS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=132, Percent_Identity=37.1212121212121, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789099, Length=109, Percent_Identity=35.7798165137615, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082297, Length=99, Percent_Identity=37.3737373737374, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082174, Length=175, Percent_Identity=29.1428571428571, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32833; Mature: 32702

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTVFIQGRNGVTRWQPSKRWLLLPILLLATGTGIYQHNSARFENQQASVDNDRLVREQ
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHH
QKKQVLELKSATESQLAMLATHVARMQAKITRLEALGQQVAQQNKLAEDFDFSSEVGVGG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
LSELGTNIELGQLIDDMDKLASRIDNNNVQLSLLETVSSNHHIDDERYISGIPLDKGWLS
HHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCHHHHCCCCCCCCCCCC
SPYGLRNDPFNGRRSVHKGIDFTGREGAKVVATAAGVVTWAGNMFGYGELVEIDHGNGFR
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCEEEEEECCCCCC
TRYGHNKALSVTVGDVVAKGDTIASMGSTGRSTGAHVHYEVLRGGQQIDPQKFVYRKAS
EECCCCCEEEEEHHHHHCCCCCHHHCCCCCCCCCCEEEHHHHCCCCCCCHHHHHEECCC
>Mature Secondary Structure 
SVTVFIQGRNGVTRWQPSKRWLLLPILLLATGTGIYQHNSARFENQQASVDNDRLVREQ
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHH
QKKQVLELKSATESQLAMLATHVARMQAKITRLEALGQQVAQQNKLAEDFDFSSEVGVGG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
LSELGTNIELGQLIDDMDKLASRIDNNNVQLSLLETVSSNHHIDDERYISGIPLDKGWLS
HHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCHHHHCCCCCCCCCCCC
SPYGLRNDPFNGRRSVHKGIDFTGREGAKVVATAAGVVTWAGNMFGYGELVEIDHGNGFR
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCEEEEEECCCCCC
TRYGHNKALSVTVGDVVAKGDTIASMGSTGRSTGAHVHYEVLRGGQQIDPQKFVYRKAS
EECCCCCEEEEEHHHHHCCCCCHHHCCCCCCCCCCEEEHHHHCCCCCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]