| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597188
Identifier: 120597188
GI number: 120597188
Start: 385395
End: 385748
Strand: Direct
Name: 120597188
Synonym: Sputw3181_0357
Alternate gene names: NA
Gene position: 385395-385748 (Clockwise)
Preceding gene: 120597187
Following gene: 120597189
Centisome position: 8.19
GC content: 38.14
Gene sequence:
>354_bases TTGGCGAAAAACCCTATAGAATTTAATTATTTATCGATAGGAAAGTATATGCATGAGTTTTTAGCTTGGTATACCAGTCC TCTAGGGACGACAATTGCTTGGTTTTGCACGGTTGTTGGTTTCATTTTTTCGCTATCACAACGAAACGAAAAGAAGAAGC TTAAAGTTCAGTGTGAAAGCTATCAAGCCAGTAACTATGAATTTAAGGTTAAGTGCGAAAAGCTTGAAGCGAATAACTAC GAACTACAACAGCAGATTATTAGCATCAAAAACAACAGCACCCATGACAACCAACAAGATGTCAAGCAAGAAGGTACTAC CAACTGTAGTGGCACACTGAATTTGGCCACCTAA
Upstream 100 bases:
>100_bases TGAGCACTACCGATTGCTCTCACCTCCCTATAAGATTGTCGAACATTAGATGTTAAAACCATTGATTAAAAACACAAATG TATAACTTCAACCTGTTAAA
Downstream 100 bases:
>100_bases TAAGAAATGTTATGATCTCATTCATAGCAAATTTAGGTGACAAAATGAATAAAAGTAAACGTGCTCGATATAGCGCAGCG ATTAAACTCGAAACTGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MAKNPIEFNYLSIGKYMHEFLAWYTSPLGTTIAWFCTVVGFIFSLSQRNEKKKLKVQCESYQASNYEFKVKCEKLEANNY ELQQQIISIKNNSTHDNQQDVKQEGTTNCSGTLNLAT
Sequences:
>Translated_117_residues MAKNPIEFNYLSIGKYMHEFLAWYTSPLGTTIAWFCTVVGFIFSLSQRNEKKKLKVQCESYQASNYEFKVKCEKLEANNY ELQQQIISIKNNSTHDNQQDVKQEGTTNCSGTLNLAT >Mature_116_residues AKNPIEFNYLSIGKYMHEFLAWYTSPLGTTIAWFCTVVGFIFSLSQRNEKKKLKVQCESYQASNYEFKVKCEKLEANNYE LQQQIISIKNNSTHDNQQDVKQEGTTNCSGTLNLAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13474; Mature: 13343
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNPIEFNYLSIGKYMHEFLAWYTSPLGTTIAWFCTVVGFIFSLSQRNEKKKLKVQCES CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECC YQASNYEFKVKCEKLEANNYELQQQIISIKNNSTHDNQQDVKQEGTTNCSGTLNLAT CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure AKNPIEFNYLSIGKYMHEFLAWYTSPLGTTIAWFCTVVGFIFSLSQRNEKKKLKVQCES CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECC YQASNYEFKVKCEKLEANNYELQQQIISIKNNSTHDNQQDVKQEGTTNCSGTLNLAT CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA