Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is insN [H]

Identifier: 120597189

GI number: 120597189

Start: 385793

End: 386104

Strand: Direct

Name: insN [H]

Synonym: Sputw3181_0358

Alternate gene names: 120597189

Gene position: 385793-386104 (Clockwise)

Preceding gene: 120597188

Following gene: 120597190

Centisome position: 8.19

GC content: 43.59

Gene sequence:

>312_bases
ATGAATAAAAGTAAACGTGCTCGATATAGCGCAGCGATTAAACTCGAAACTGCCCAATTAGTCATTGACCAAGGCTATAC
ACAAGAAGCGGCTGCCAAAGCCATGAACGTAGGTAAATCAACGGTCAGTAAGTGGGTAACGCAACTTCAGGTTGAACGCA
AAGGGCTTACTCCTAAAGCCTCACCCATGACGCCTGAGCAGATTGAGATTAGGGCACTTAAACGTGAAATTGAGCGCATA
AATCTCGAGAAAGAAATCTTAAAAAAGGCTACTGCTCTATTGATGTCGGACTCGCTGAACAATTCTCGATAA

Upstream 100 bases:

>100_bases
ATGTCAAGCAAGAAGGTACTACCAACTGTAGTGGCACACTGAATTTGGCCACCTAATAAGAAATGTTATGATCTCATTCA
TAGCAAATTTAGGTGACAAA

Downstream 100 bases:

>100_bases
TCGAGGAGCTCAATGAGAGCAGTAAATACCCTATTTCAGTGTTATGCCATGCATTTAACGTGAACCGCAGTAGTTACCGT
TATTGGGTGAGTCATGAGCA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKASPMTPEQIEIRALKREIERI
NLEKEILKKATALLMSDSLNNSR

Sequences:

>Translated_103_residues
MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKASPMTPEQIEIRALKREIERI
NLEKEILKKATALLMSDSLNNSR
>Mature_103_residues
MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKASPMTPEQIEIRALKREIERI
NLEKEILKKATALLMSDSLNNSR

Specific function: Involved in the transposition of the insertion sequence IS911 [H]

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 11558; Mature: 11558

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKA
CCCCHHHHHHHHEEHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
SPMTPEQIEIRALKREIERINLEKEILKKATALLMSDSLNNSR
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKA
CCCCHHHHHHHHEEHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
SPMTPEQIEIRALKREIERINLEKEILKKATALLMSDSLNNSR
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2163395 [H]