| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is insN [H]
Identifier: 120597189
GI number: 120597189
Start: 385793
End: 386104
Strand: Direct
Name: insN [H]
Synonym: Sputw3181_0358
Alternate gene names: 120597189
Gene position: 385793-386104 (Clockwise)
Preceding gene: 120597188
Following gene: 120597190
Centisome position: 8.19
GC content: 43.59
Gene sequence:
>312_bases ATGAATAAAAGTAAACGTGCTCGATATAGCGCAGCGATTAAACTCGAAACTGCCCAATTAGTCATTGACCAAGGCTATAC ACAAGAAGCGGCTGCCAAAGCCATGAACGTAGGTAAATCAACGGTCAGTAAGTGGGTAACGCAACTTCAGGTTGAACGCA AAGGGCTTACTCCTAAAGCCTCACCCATGACGCCTGAGCAGATTGAGATTAGGGCACTTAAACGTGAAATTGAGCGCATA AATCTCGAGAAAGAAATCTTAAAAAAGGCTACTGCTCTATTGATGTCGGACTCGCTGAACAATTCTCGATAA
Upstream 100 bases:
>100_bases ATGTCAAGCAAGAAGGTACTACCAACTGTAGTGGCACACTGAATTTGGCCACCTAATAAGAAATGTTATGATCTCATTCA TAGCAAATTTAGGTGACAAA
Downstream 100 bases:
>100_bases TCGAGGAGCTCAATGAGAGCAGTAAATACCCTATTTCAGTGTTATGCCATGCATTTAACGTGAACCGCAGTAGTTACCGT TATTGGGTGAGTCATGAGCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKASPMTPEQIEIRALKREIERI NLEKEILKKATALLMSDSLNNSR
Sequences:
>Translated_103_residues MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKASPMTPEQIEIRALKREIERI NLEKEILKKATALLMSDSLNNSR >Mature_103_residues MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKASPMTPEQIEIRALKREIERI NLEKEILKKATALLMSDSLNNSR
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11558; Mature: 11558
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKA CCCCHHHHHHHHEEHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC SPMTPEQIEIRALKREIERINLEKEILKKATALLMSDSLNNSR CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNKSKRARYSAAIKLETAQLVIDQGYTQEAAAKAMNVGKSTVSKWVTQLQVERKGLTPKA CCCCHHHHHHHHEEHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC SPMTPEQIEIRALKREIERINLEKEILKKATALLMSDSLNNSR CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2163395 [H]