| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597180
Identifier: 120597180
GI number: 120597180
Start: 375256
End: 376236
Strand: Direct
Name: 120597180
Synonym: Sputw3181_0349
Alternate gene names: NA
Gene position: 375256-376236 (Clockwise)
Preceding gene: 120597179
Following gene: 120597181
Centisome position: 7.97
GC content: 43.32
Gene sequence:
>981_bases ATGTTTGTTGGCGATTTAGCGATTACACTGAATTTACTGAGTGTGGCAGTGCTGGCATTTGCTATCAGTGTTGTGTTCAT CTCGATCGCTCTACGATTCACTCTGCCTAGATTAGATTATCTCACTTTCAGGTTACGTAAAGTTATCCTATGGTCGTTAG TCACAGCGCCTTGGTGGATAGCGATTAATTGTGTTGTCTTTTTCTGGCCGAAGCAGCAAGATTTGTTTTCTGCAGCTTGG TTAAATGAATTTGTTCACTGGCACCATGTGGATATTTTTAGCTTTGACAGTTGGCACGCAGTTACCTTGCTTTCGGCCTC GGGATTTTTGATTTGGTCGATGATAAAGACTGTTTATTCTCGCAAAAAACAATCATCAACAATGGCGTCTCTGCTTGGAT TCTCAGATGTTTACCCCCAAGAAGCCAACTCTCAGCATCGTTATTATTTATTACCTTTGGCAATACCTGCAGCTTTTACC ACAGGGCTTATTTCTCCCAAAATCTATCTAACCACGGCATTACAAGAACGGGTTAATGAGCAGGAATTAGATATTATTAT CCGGCACGAAATGGCGCATGTCGCTGCCCGAGATCCTCTGTTTAAAGTGATCTTCGCGACTTTTGCAGGCTTTTTCCCGC TCGGGATGAAACAACATTTTGTCAGGCAATTTACCTTGCTTACTGAACAGATAGCAGATCATGCAGTGACAAATGAACAC GACAATCTTGACGTCGCTCAGGCTCTGGTTAACGTTGCCAGAATGCAACGAAGCGTAACGCTAGGTTGTGATGGGTTGCA AACGAGCTATTTCGGCAATGATCAAACCAGCGTGCGAGTGCAGCGCCTAATTTATCCTGTATGTACATCTTCTCGATTGG CAATCGGTTTAGCTATTGTGTTGTTAGTCATAGCACCAGTATTAACCGCCTCCACGGTGGATAGCCTCCACCATATTATC GAAACTTTTTTCACCCATTAA
Upstream 100 bases:
>100_bases CATTTAGTTCAGTATCAGCTAATCTGAATGATGCTCAGCTAGATATCTTGGAACATTTAATTGAAGAACAACGTCAACTT CGGAAAGGATAATTAGGCTT
Downstream 100 bases:
>100_bases GTAAGGATTGGGAATGAAAGCTATTCTTTGTAAACGCACAGCCAAAAAACCGATAGGCCATCGGTTTTCTGCTGCATTGA TAGGAATGAGTATTATCCTG
Product: peptidase M56, BlaR1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MFVGDLAITLNLLSVAVLAFAISVVFISIALRFTLPRLDYLTFRLRKVILWSLVTAPWWIAINCVVFFWPKQQDLFSAAW LNEFVHWHHVDIFSFDSWHAVTLLSASGFLIWSMIKTVYSRKKQSSTMASLLGFSDVYPQEANSQHRYYLLPLAIPAAFT TGLISPKIYLTTALQERVNEQELDIIIRHEMAHVAARDPLFKVIFATFAGFFPLGMKQHFVRQFTLLTEQIADHAVTNEH DNLDVAQALVNVARMQRSVTLGCDGLQTSYFGNDQTSVRVQRLIYPVCTSSRLAIGLAIVLLVIAPVLTASTVDSLHHII ETFFTH
Sequences:
>Translated_326_residues MFVGDLAITLNLLSVAVLAFAISVVFISIALRFTLPRLDYLTFRLRKVILWSLVTAPWWIAINCVVFFWPKQQDLFSAAW LNEFVHWHHVDIFSFDSWHAVTLLSASGFLIWSMIKTVYSRKKQSSTMASLLGFSDVYPQEANSQHRYYLLPLAIPAAFT TGLISPKIYLTTALQERVNEQELDIIIRHEMAHVAARDPLFKVIFATFAGFFPLGMKQHFVRQFTLLTEQIADHAVTNEH DNLDVAQALVNVARMQRSVTLGCDGLQTSYFGNDQTSVRVQRLIYPVCTSSRLAIGLAIVLLVIAPVLTASTVDSLHHII ETFFTH >Mature_326_residues MFVGDLAITLNLLSVAVLAFAISVVFISIALRFTLPRLDYLTFRLRKVILWSLVTAPWWIAINCVVFFWPKQQDLFSAAW LNEFVHWHHVDIFSFDSWHAVTLLSASGFLIWSMIKTVYSRKKQSSTMASLLGFSDVYPQEANSQHRYYLLPLAIPAAFT TGLISPKIYLTTALQERVNEQELDIIIRHEMAHVAARDPLFKVIFATFAGFFPLGMKQHFVRQFTLLTEQIADHAVTNEH DNLDVAQALVNVARMQRSVTLGCDGLQTSYFGNDQTSVRVQRLIYPVCTSSRLAIGLAIVLLVIAPVLTASTVDSLHHII ETFFTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36902; Mature: 36902
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVGDLAITLNLLSVAVLAFAISVVFISIALRFTLPRLDYLTFRLRKVILWSLVTAPWWI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH AINCVVFFWPKQQDLFSAAWLNEFVHWHHVDIFSFDSWHAVTLLSASGFLIWSMIKTVYS EEEEEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH RKKQSSTMASLLGFSDVYPQEANSQHRYYLLPLAIPAAFTTGLISPKIYLTTALQERVNE HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCH QELDIIIRHEMAHVAARDPLFKVIFATFAGFFPLGMKQHFVRQFTLLTEQIADHAVTNEH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DNLDVAQALVNVARMQRSVTLGCDGLQTSYFGNDQTSVRVQRLIYPVCTSSRLAIGLAIV CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LLVIAPVLTASTVDSLHHIIETFFTH HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFVGDLAITLNLLSVAVLAFAISVVFISIALRFTLPRLDYLTFRLRKVILWSLVTAPWWI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH AINCVVFFWPKQQDLFSAAWLNEFVHWHHVDIFSFDSWHAVTLLSASGFLIWSMIKTVYS EEEEEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH RKKQSSTMASLLGFSDVYPQEANSQHRYYLLPLAIPAAFTTGLISPKIYLTTALQERVNE HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCH QELDIIIRHEMAHVAARDPLFKVIFATFAGFFPLGMKQHFVRQFTLLTEQIADHAVTNEH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DNLDVAQALVNVARMQRSVTLGCDGLQTSYFGNDQTSVRVQRLIYPVCTSSRLAIGLAIV CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LLVIAPVLTASTVDSLHHIIETFFTH HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA