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The map label for this gene is 120597179

Identifier: 120597179

GI number: 120597179

Start: 374870

End: 375247

Strand: Direct

Name: 120597179

Synonym: Sputw3181_0348

Alternate gene names: NA

Gene position: 374870-375247 (Clockwise)

Preceding gene: 120597177

Following gene: 120597180

Centisome position: 7.96

GC content: 42.33

Gene sequence:

>378_bases
ATGCAGTTAGGTGAATTAGAAAAGCAGGTTTTGCAACATCTTTGGACTGAGTCTGAAGCGGATGCTAAGCAAGTACATGC
GGTGCTTGGGTTGTCTCGAGAGAGTTCACTCAATACCATTCAGAGCACCTTAGATCGCTTGTTTAAAAAAGGATTACTGA
GTCGAACGAAGCAGGGTCATGCCTACTTTTATAGAGCAAAAGTCGACAGAGAAGCCTTGATCGCCAAACTTATTACCAAT
GTTACTAGCGACTTTGTCGAAGAGGGTGAGCACAGTCTGATCGCGGCATTTAGTTCAGTATCAGCTAATCTGAATGATGC
TCAGCTAGATATCTTGGAACATTTAATTGAAGAACAACGTCAACTTCGGAAAGGATAA

Upstream 100 bases:

>100_bases
AGCCAGCCCATTCCACCCTCACTATGAGTTATTAAAAACCGATTGCCTATCGGTTTTTGTTCTGCCACTATAGCGGTCAT
TATGGCAAGAGAAAAGTGTT

Downstream 100 bases:

>100_bases
TTAGGCTTATGTTTGTTGGCGATTTAGCGATTACACTGAATTTACTGAGTGTGGCAGTGCTGGCATTTGCTATCAGTGTT
GTGTTCATCTCGATCGCTCT

Product: transcriptional regulator, TrmB

Products: NA

Alternate protein names: Transcriptional Repressor CopY Family; Transcriptional Repressor CopY Family Protein; Transcriptional Regulator; CopY Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; Transcriptional Regulator TrmB

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MQLGELEKQVLQHLWTESEADAKQVHAVLGLSRESSLNTIQSTLDRLFKKGLLSRTKQGHAYFYRAKVDREALIAKLITN
VTSDFVEEGEHSLIAAFSSVSANLNDAQLDILEHLIEEQRQLRKG

Sequences:

>Translated_125_residues
MQLGELEKQVLQHLWTESEADAKQVHAVLGLSRESSLNTIQSTLDRLFKKGLLSRTKQGHAYFYRAKVDREALIAKLITN
VTSDFVEEGEHSLIAAFSSVSANLNDAQLDILEHLIEEQRQLRKG
>Mature_125_residues
MQLGELEKQVLQHLWTESEADAKQVHAVLGLSRESSLNTIQSTLDRLFKKGLLSRTKQGHAYFYRAKVDREALIAKLITN
VTSDFVEEGEHSLIAAFSSVSANLNDAQLDILEHLIEEQRQLRKG

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14116; Mature: 14116

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLGELEKQVLQHLWTESEADAKQVHAVLGLSRESSLNTIQSTLDRLFKKGLLSRTKQGH
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
AYFYRAKVDREALIAKLITNVTSDFVEEGEHSLIAAFSSVSANLNDAQLDILEHLIEEQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QLRKG
HHHCC
>Mature Secondary Structure
MQLGELEKQVLQHLWTESEADAKQVHAVLGLSRESSLNTIQSTLDRLFKKGLLSRTKQGH
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
AYFYRAKVDREALIAKLITNVTSDFVEEGEHSLIAAFSSVSANLNDAQLDILEHLIEEQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QLRKG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA