Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597150

Identifier: 120597150

GI number: 120597150

Start: 345936

End: 346781

Strand: Direct

Name: 120597150

Synonym: Sputw3181_0319

Alternate gene names: NA

Gene position: 345936-346781 (Clockwise)

Preceding gene: 120597149

Following gene: 120597151

Centisome position: 7.35

GC content: 49.29

Gene sequence:

>846_bases
ATGTTACAGGCAATTCTCCATGGAAAGGCGGGACGTATCGACGGCGACAAAGTCCAGTCGATAAGTTGGCGTGAAGTATT
CAAGGGACGGGAAGACTTGATGACAGCGGCGGTATTTGGCCGCTTTGCCTATCTGTCTGCGCCAGTGCAAGCAACGCTTA
TGCAACGCTGGCTTGGTGTGACTGAGCCAGCGTTTGATGACTTTGAAAAGATCGATTTCTGGCCTAGTTATCAATTGGTG
AGTAATGACCAAAAGAGAAGGGTTGAGCCAGATGTAGTCCTTAATTTTGCTAGTGCTACCGTGATTTTGGAGATCAAGCC
ACCTAATGGTGGAGACCAAGACATTGACCAGTGGCAGCGTGAGGTTGAGTCGTTTCTTCTGTCTGGAGAGCGCAGCCAGC
TACCACTGTTTTTTTTAGCCATTGGGCGTATACCAAACAAATTCGTGTTTGGTAACTGGGCTAAACAGCTCAGTAAAAAA
CTTGATGGTATTAATGCCGTGGCGTGGCAACGAGTCGTTAACGACTTACTGGAACTCGATAATGGTAAGTTAGCGTGTGA
GCCAAATACACAAGATAAGCGCATAATTGCTGACATTCTGCAAACCGCGGGCTTGTATCAGCTCAGAACACAATTCTATA
GCTGGAAAACGTTACTTGACCACCCGCTACCACGCCTCAGCTTACAGCAAGCGCTATTGCGCGATAAACCGCCCCCCAAA
GCGCCAGTTCAACCAGAACCGCAACCGTTTTCAGCGACCCAAGCACCACACAGTTGGCACGACCTCGCCGCGTTTGCCAC
AGCGCACCCCATTTCACTCAAGGACATCAGCACATGGAACAAGTAG

Upstream 100 bases:

>100_bases
TGAAAATAAGTTGTCAAAACTGAATGATACTAAAAAAGCCCTGATGCAGGATCTGTTAACGGGTAAGGTGCGGGTAAATA
TCGACTAGCAAGGACGGGTA

Downstream 100 bases:

>100_bases
ATGATTTGCTATTGCAGGTACGTACCGCACACCGTTTATTGGCGGCGTATTATCAACGTATTGTGCCCGCAATAGGTGAT
ATGGCGAGCATGCTAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLQAILHGKAGRIDGDKVQSISWREVFKGREDLMTAAVFGRFAYLSAPVQATLMQRWLGVTEPAFDDFEKIDFWPSYQLV
SNDQKRRVEPDVVLNFASATVILEIKPPNGGDQDIDQWQREVESFLLSGERSQLPLFFLAIGRIPNKFVFGNWAKQLSKK
LDGINAVAWQRVVNDLLELDNGKLACEPNTQDKRIIADILQTAGLYQLRTQFYSWKTLLDHPLPRLSLQQALLRDKPPPK
APVQPEPQPFSATQAPHSWHDLAAFATAHPISLKDISTWNK

Sequences:

>Translated_281_residues
MLQAILHGKAGRIDGDKVQSISWREVFKGREDLMTAAVFGRFAYLSAPVQATLMQRWLGVTEPAFDDFEKIDFWPSYQLV
SNDQKRRVEPDVVLNFASATVILEIKPPNGGDQDIDQWQREVESFLLSGERSQLPLFFLAIGRIPNKFVFGNWAKQLSKK
LDGINAVAWQRVVNDLLELDNGKLACEPNTQDKRIIADILQTAGLYQLRTQFYSWKTLLDHPLPRLSLQQALLRDKPPPK
APVQPEPQPFSATQAPHSWHDLAAFATAHPISLKDISTWNK
>Mature_281_residues
MLQAILHGKAGRIDGDKVQSISWREVFKGREDLMTAAVFGRFAYLSAPVQATLMQRWLGVTEPAFDDFEKIDFWPSYQLV
SNDQKRRVEPDVVLNFASATVILEIKPPNGGDQDIDQWQREVESFLLSGERSQLPLFFLAIGRIPNKFVFGNWAKQLSKK
LDGINAVAWQRVVNDLLELDNGKLACEPNTQDKRIIADILQTAGLYQLRTQFYSWKTLLDHPLPRLSLQQALLRDKPPPK
APVQPEPQPFSATQAPHSWHDLAAFATAHPISLKDISTWNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31870; Mature: 31870

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQAILHGKAGRIDGDKVQSISWREVFKGREDLMTAAVFGRFAYLSAPVQATLMQRWLGV
CCCHHHCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
TEPAFDDFEKIDFWPSYQLVSNDQKRRVEPDVVLNFASATVILEIKPPNGGDQDIDQWQR
CCCCHHHHHHCCCCCCHHHHCCCHHHCCCHHHEEEEECEEEEEEEECCCCCCHHHHHHHH
EVESFLLSGERSQLPLFFLAIGRIPNKFVFGNWAKQLSKKLDGINAVAWQRVVNDLLELD
HHHHHHHCCCCCCCCCCEEEHHCCCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
NGKLACEPNTQDKRIIADILQTAGLYQLRTQFYSWKTLLDHPLPRLSLQQALLRDKPPPK
CCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
APVQPEPQPFSATQAPHSWHDLAAFATAHPISLKDISTWNK
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLQAILHGKAGRIDGDKVQSISWREVFKGREDLMTAAVFGRFAYLSAPVQATLMQRWLGV
CCCHHHCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
TEPAFDDFEKIDFWPSYQLVSNDQKRRVEPDVVLNFASATVILEIKPPNGGDQDIDQWQR
CCCCHHHHHHCCCCCCHHHHCCCHHHCCCHHHEEEEECEEEEEEEECCCCCCHHHHHHHH
EVESFLLSGERSQLPLFFLAIGRIPNKFVFGNWAKQLSKKLDGINAVAWQRVVNDLLELD
HHHHHHHCCCCCCCCCCEEEHHCCCCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
NGKLACEPNTQDKRIIADILQTAGLYQLRTQFYSWKTLLDHPLPRLSLQQALLRDKPPPK
CCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
APVQPEPQPFSATQAPHSWHDLAAFATAHPISLKDISTWNK
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA