Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597151

Identifier: 120597151

GI number: 120597151

Start: 346769

End: 347446

Strand: Direct

Name: 120597151

Synonym: Sputw3181_0320

Alternate gene names: NA

Gene position: 346769-347446 (Clockwise)

Preceding gene: 120597150

Following gene: 120597152

Centisome position: 7.36

GC content: 44.84

Gene sequence:

>678_bases
ATGGAACAAGTAGATGATTTGCTATTGCAGGTACGTACCGCACACCGTTTATTGGCGGCGTATTATCAACGTATTGTGCC
CGCAATAGGTGATATGGCGAGCATGCTAGAGCTTGATTTCTATTACTGGGGTAATGCTGATTTTAATAGCGTCCCAAGTG
GACAATATAACGTCACAACATACGACCCATGGCGTTTGTTGCCCGCGATGAATACTTCATATCTCTATTACAAGTTCGCT
GATAAAGATAAGAATAAAATTGATGTAGGTGATTATTTTGTAGAGTTTGCCGTGATCTCTGATACCGGTGTTGATAGCCA
TGGTGATGGTCATTCCAATGAGTTAGACGCATTGGAGTTGACCCCAAATGTTGATAACGCACTGAGTTTGCTTAGAGTCA
CGATCTGCGCGCCTTACAAATTGTTTGATTACAACTTGTATAACACGGTGTGGGCGGCCACTGCTTACCCAGAGTTTTCT
TTAGAACCTAATCCCCAAAAAGATGAAAATGAAGTGGAATGTTTCGTTTGTGGCTTCGAGTGTTCGCTTGGTGAACTAAT
GCAGAAGAATGGCGTAGAGCAGGTGGTTGAACGTATTCAACAACACATCTCCAGCACCGTCGCCGCTGCCGAAGCCGAGC
ATGAACGTGTTGCTGGTGGGCAGGGTGTTGCCTCATGA

Upstream 100 bases:

>100_bases
CAGAACCGCAACCGTTTTCAGCGACCCAAGCACCACACAGTTGGCACGACCTCGCCGCGTTTGCCACAGCGCACCCCATT
TCACTCAAGGACATCAGCAC

Downstream 100 bases:

>100_bases
GCAATGATGAATTTGACAAGGTAGAACGCCCCGCCATTGCGCAGCTCCATCAGCTAGGCTGGCGTTACGTTCCCGGTAAA
ACGCTGGCACCAGAGCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MEQVDDLLLQVRTAHRLLAAYYQRIVPAIGDMASMLELDFYYWGNADFNSVPSGQYNVTTYDPWRLLPAMNTSYLYYKFA
DKDKNKIDVGDYFVEFAVISDTGVDSHGDGHSNELDALELTPNVDNALSLLRVTICAPYKLFDYNLYNTVWAATAYPEFS
LEPNPQKDENEVECFVCGFECSLGELMQKNGVEQVVERIQQHISSTVAAAEAEHERVAGGQGVAS

Sequences:

>Translated_225_residues
MEQVDDLLLQVRTAHRLLAAYYQRIVPAIGDMASMLELDFYYWGNADFNSVPSGQYNVTTYDPWRLLPAMNTSYLYYKFA
DKDKNKIDVGDYFVEFAVISDTGVDSHGDGHSNELDALELTPNVDNALSLLRVTICAPYKLFDYNLYNTVWAATAYPEFS
LEPNPQKDENEVECFVCGFECSLGELMQKNGVEQVVERIQQHISSTVAAAEAEHERVAGGQGVAS
>Mature_225_residues
MEQVDDLLLQVRTAHRLLAAYYQRIVPAIGDMASMLELDFYYWGNADFNSVPSGQYNVTTYDPWRLLPAMNTSYLYYKFA
DKDKNKIDVGDYFVEFAVISDTGVDSHGDGHSNELDALELTPNVDNALSLLRVTICAPYKLFDYNLYNTVWAATAYPEFS
LEPNPQKDENEVECFVCGFECSLGELMQKNGVEQVVERIQQHISSTVAAAEAEHERVAGGQGVAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25249; Mature: 25249

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQVDDLLLQVRTAHRLLAAYYQRIVPAIGDMASMLELDFYYWGNADFNSVPSGQYNVTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEE
YDPWRLLPAMNTSYLYYKFADKDKNKIDVGDYFVEFAVISDTGVDSHGDGHSNELDALEL
ECCCEECCCCCCCEEEEEECCCCCCEEEHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEE
TPNVDNALSLLRVTICAPYKLFDYNLYNTVWAATAYPEFSLEPNPQKDENEVECFVCGFE
CCCHHHHHHHHHHHHHCCCCEEECCHHHHHEEHCCCCCCCCCCCCCCCCCCEEEEEEECC
CSLGELMQKNGVEQVVERIQQHISSTVAAAEAEHERVAGGQGVAS
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEQVDDLLLQVRTAHRLLAAYYQRIVPAIGDMASMLELDFYYWGNADFNSVPSGQYNVTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEE
YDPWRLLPAMNTSYLYYKFADKDKNKIDVGDYFVEFAVISDTGVDSHGDGHSNELDALEL
ECCCEECCCCCCCEEEEEECCCCCCEEEHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEE
TPNVDNALSLLRVTICAPYKLFDYNLYNTVWAATAYPEFSLEPNPQKDENEVECFVCGFE
CCCHHHHHHHHHHHHHCCCCEEECCHHHHHEEHCCCCCCCCCCCCCCCCCCEEEEEEECC
CSLGELMQKNGVEQVVERIQQHISSTVAAAEAEHERVAGGQGVAS
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA