Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597141

Identifier: 120597141

GI number: 120597141

Start: 337047

End: 337493

Strand: Direct

Name: 120597141

Synonym: Sputw3181_0310

Alternate gene names: NA

Gene position: 337047-337493 (Clockwise)

Preceding gene: 120597140

Following gene: 120597147

Centisome position: 7.16

GC content: 48.1

Gene sequence:

>447_bases
ATGAGTGATAAACAAACGACTACTGAAACGGCTAAAGATACCATCGCCCGTCTTAGAGCTAATCGTCAGCAACGGAGTGA
TATTGCGATTGAGGCGTCACAGCATCGGCAACCCGTAAATATTGGAGATGCTCCAATAAAGCCAACCCCTAAACGCGCCT
CTAAGCAATCAGGCGGTGTTAATACGGTAGAACGCAAGAATGCGATTAACGCTATCACACAACGGCTCTTACGCAGTGAG
CTAAGCCAAGGGCAAGCTCTGAAAGCTCTGCGAGTTGAGGTGCTAGGACTCACGCAAGATGAGTATGCAAACTTGGTTAA
AGTATCGCGCAAGACCCTCTCGGACGTTGAGAACGACCGTGGTAGTTTTAAGACCGATATTCTCGACCGACTATTTAAGC
CTTTTGGTCTTAAGGTCGGGATTGTGCCTATCTCTGTTGGGCCTTAG

Upstream 100 bases:

>100_bases
AGCAACGCTTAATAGAGCGTGGTGTGCCACTGCGCATTATCGACATGCCAGCAATTGGCTTTGCTTACCTCGAAGACAAA
CTAACGCGTTGGGGATTAGC

Downstream 100 bases:

>100_bases
GCGGCCCATTGCTCGCCTAAGGCCTCGGCTTGTTGTAAAACCAATTGCACTGCGCCATCAGCTTGGTCGGGCGGATATTT
GTATTTACGTAATATTCGCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSDKQTTTETAKDTIARLRANRQQRSDIAIEASQHRQPVNIGDAPIKPTPKRASKQSGGVNTVERKNAINAITQRLLRSE
LSQGQALKALRVEVLGLTQDEYANLVKVSRKTLSDVENDRGSFKTDILDRLFKPFGLKVGIVPISVGP

Sequences:

>Translated_148_residues
MSDKQTTTETAKDTIARLRANRQQRSDIAIEASQHRQPVNIGDAPIKPTPKRASKQSGGVNTVERKNAINAITQRLLRSE
LSQGQALKALRVEVLGLTQDEYANLVKVSRKTLSDVENDRGSFKTDILDRLFKPFGLKVGIVPISVGP
>Mature_147_residues
SDKQTTTETAKDTIARLRANRQQRSDIAIEASQHRQPVNIGDAPIKPTPKRASKQSGGVNTVERKNAINAITQRLLRSEL
SQGQALKALRVEVLGLTQDEYANLVKVSRKTLSDVENDRGSFKTDILDRLFKPFGLKVGIVPISVGP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16289; Mature: 16158

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKQTTTETAKDTIARLRANRQQRSDIAIEASQHRQPVNIGDAPIKPTPKRASKQSGGV
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEHHCCCCCCCCCCCCCCCCCCHHCCCCCCC
NTVERKNAINAITQRLLRSELSQGQALKALRVEVLGLTQDEYANLVKVSRKTLSDVENDR
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
GSFKTDILDRLFKPFGLKVGIVPISVGP
CCHHHHHHHHHHHHCCCEEEEEEECCCC
>Mature Secondary Structure 
SDKQTTTETAKDTIARLRANRQQRSDIAIEASQHRQPVNIGDAPIKPTPKRASKQSGGV
CCCHHHHHHHHHHHHHHHHHHHHHHCEEEEHHCCCCCCCCCCCCCCCCCCHHCCCCCCC
NTVERKNAINAITQRLLRSELSQGQALKALRVEVLGLTQDEYANLVKVSRKTLSDVENDR
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
GSFKTDILDRLFKPFGLKVGIVPISVGP
CCHHHHHHHHHHHHCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA