Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597045

Identifier: 120597045

GI number: 120597045

Start: 235650

End: 236153

Strand: Direct

Name: 120597045

Synonym: Sputw3181_0213

Alternate gene names: NA

Gene position: 235650-236153 (Clockwise)

Preceding gene: 120597044

Following gene: 120597047

Centisome position: 5.0

GC content: 43.65

Gene sequence:

>504_bases
ATGCAGCCGATAACGGGGTTTTCACTGCTAACAGAGCATACCGATGGACTTGAGCCTAATCCATTGAAAATGCCTTTGTA
TTTCAATGGCCAACCTACTCATACCTTTATTGCTGGCTTAGTGATTGAAGGCCAATATCGCTGCGTTTTACCCAATAAAA
CCTCGGGGTATTTGGTCATCACTTCTTTTGATTGTCCCTTCGAAGAATCGACCGAGTTTAGTCTGCTTGATGAAGGGTTT
AAGCTCATTGCGACAACCTCTTTGGCGCAAATGTACGATTCTTTTCTGCTTTATGCCCATTGGCCTATGACGGATAACCG
ACTGAGGTTGCACTATTACGGTCAGTTTGTGCTGGATTTAGTGATGACAACGGGCAGTTCTTGGTTACCTTTTCAGCCAA
AACTTAAACTGGTTGAAGTTGTCGATCCACAAAGCGATCCACAAACAGCCTCCTCTCTTGCTGAATTAGCTCAGCGTTTA
GCGCGGATTAATAATATAAACTGA

Upstream 100 bases:

>100_bases
GGAAAAGCCGTCAGTCCTAGTGATTTGAATTTGCAAGAGCCGCGTGATGTGTGTGTTCGCGGGTAGGCGAGATAGGTAGG
CGAGATAAGTGGGGTAAGGG

Downstream 100 bases:

>100_bases
GTGAGGTTTGAATTAAATTGAGTTAAAAAAGAAAGGGCTATTCGCCCTTTCATGTTTATCACTTGTATCTATTACTCATG
CGGAAAGTTTTATAAGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MQPITGFSLLTEHTDGLEPNPLKMPLYFNGQPTHTFIAGLVIEGQYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEGF
KLIATTSLAQMYDSFLLYAHWPMTDNRLRLHYYGQFVLDLVMTTGSSWLPFQPKLKLVEVVDPQSDPQTASSLAELAQRL
ARINNIN

Sequences:

>Translated_167_residues
MQPITGFSLLTEHTDGLEPNPLKMPLYFNGQPTHTFIAGLVIEGQYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEGF
KLIATTSLAQMYDSFLLYAHWPMTDNRLRLHYYGQFVLDLVMTTGSSWLPFQPKLKLVEVVDPQSDPQTASSLAELAQRL
ARINNIN
>Mature_167_residues
MQPITGFSLLTEHTDGLEPNPLKMPLYFNGQPTHTFIAGLVIEGQYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEGF
KLIATTSLAQMYDSFLLYAHWPMTDNRLRLHYYGQFVLDLVMTTGSSWLPFQPKLKLVEVVDPQSDPQTASSLAELAQRL
ARINNIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18881; Mature: 18881

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPITGFSLLTEHTDGLEPNPLKMPLYFNGQPTHTFIAGLVIEGQYRCVLPNKTSGYLVI
CCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHEEEEEEECCCEEEECCCCCCCEEEE
TSFDCPFEESTEFSLLDEGFKLIATTSLAQMYDSFLLYAHWPMTDNRLRLHYYGQFVLDL
EECCCCCCCCCCHHHHHCCCEEEHHHHHHHHHHHEEEEEECCCCCCEEEEEEHHHHHHHH
VMTTGSSWLPFQPKLKLVEVVDPQSDPQTASSLAELAQRLARINNIN
HHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPITGFSLLTEHTDGLEPNPLKMPLYFNGQPTHTFIAGLVIEGQYRCVLPNKTSGYLVI
CCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHEEEEEEECCCEEEECCCCCCCEEEE
TSFDCPFEESTEFSLLDEGFKLIATTSLAQMYDSFLLYAHWPMTDNRLRLHYYGQFVLDL
EECCCCCCCCCCHHHHHCCCEEEHHHHHHHHHHHEEEEEECCCCCCEEEEEEHHHHHHHH
VMTTGSSWLPFQPKLKLVEVVDPQSDPQTASSLAELAQRLARINNIN
HHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA