| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is fhuE [H]
Identifier: 120596923
GI number: 120596923
Start: 110012
End: 112213
Strand: Direct
Name: fhuE [H]
Synonym: Sputw3181_0090
Alternate gene names: 120596923
Gene position: 110012-112213 (Clockwise)
Preceding gene: 120596922
Following gene: 120596930
Centisome position: 2.34
GC content: 44.37
Gene sequence:
>2202_bases GTGTTACCGTATGCGTATCCTAAAGACACTACTGAAATGACTATGCGCTTCAATCTACTTCCTCTCGCTGCAGCTATTAC TTTGGCGTTAAATCCTCTGTCCGTTTTGGCTGGGGAGCAATCTTCTACAGAAACAAAAGATCAGAATATCGAAAAAATTA CTGTGATGGGTAAATATACCGTCAGTAGAACCATTGACACTGCCACAGGTTTGGGGCTGTCACTGCAGGAAACTCCGCAG TCTGTCAGTATTATGACGGCTGAGCGGATTCAAGATCAGGCACTCAATACCGTTGTCGATGTTGTTAACAATACCGTAGG TTTATCTTCCTCTAAAACAGATAACGTCCGAAATGGTTTTATGGCCCGTGGTTTTGCGGTGCAGAATTACCAGATAGACG GTGTGCCATTGTCTTGGAGTTTAGGCGGTGATGCGGGTGAGACAGTATCCGATATTTCCTTATATGAACGCGTTGAAGTC GTTCGTGGTGCCACAGGATTATTGACGGGTGCAGGAGATCCTTCCGCGTCTATTAACCTAGTGCGCAAACATGCCGATAG TGCCGAGCTTAAGGGCTATGTTGATGTTGCTACGGGTAGCTGGGATAAAAAACAAATTACAGCGGATGTTTCCAATGGCC TTAACGACAGTGGCAGTGTGCGTGGTCGTATGGTGGCTAAATATGTCAATAGCGATTCCTATCAGGATCTTTATCAAGAT CGTAAGACCATTCTTTATGGTGTAGTGGATTCAGACATCACTGAAAACACTATGCTGCGCGTCGGCGGTAGTTACAATAA CAATAACCCCAAAGGAGCGATGTGGGGCGCCTTACCCGCAATGTTCAGCGATGGTTCTGCGACAGATTGGGATGTTTCTG CCACAACGGCCGCAGACTGGAGTCGTTGGGAAACCACCAACATCAACTATTTTGCTAATTTGAATCATTATTTCAGTAAT GGTTGGCAATTGGTGGCGAACTATAATCGCATGGAATACGAAACTACCACCAAAATGATCTATATGTCCGGTTTGCTGGA TAAAGAAACCGGTGCAGGATTAAGTGGTCAGCGTTATCACAGCCATGGTGAAAGTAACTCCGATAATTTTGATTTCCAAT TGAAAGGGGATTACCAGCTCTTTAACCGTGAGCATCAATTTGTGGCAGGGGCTTTGTACAGCAAACAGAAATCCTATGCT GATACCTATGAGCCTATCCGTGAAGACATGACGGGTTGGGACTCAAAGGTGGTTGAAAACTTTTATGATTGGCGCAGTAA CACCTTCGATGAGCCGCAGTGGTCAACGGACGCTAATCGTCAGTTAAATATGGATACTGAACAGAAAGGTTTCTACGCGG CAACTCGGCTGACGATTACCGATGATTTTAAAATCATTGCTGGTGGTCGTATTTCTAGCTGGAATCGTGAAGGGGTCAGC TATGGTACTAGCACTAATTTTGGTGATGATGGTGTATTTGTACCTTATGTTGGCGCACTGTATGACATTAACGAAGAGCA TCGGGTTTACGCCAGTTATACTGAAATATTTAATCCGCAGAATGTGACTAATGCCTACGGAGAATATATAGATCCCTTAA AAGGCAAAGCCTATGAAGTGGGTTTGAAGAGCGCTTATTTGGACGATCGTCTACATACTACAGTAGCGCTGTTCAAAATT GATCAGGACAATCTGGCAACGCCAGATGGAACTGTCACCATTGACGGCAAACCAGTGACTAATTACAAGGCTGCTCAAGG TACTGAAAGTACTGGCTTTGAGTTAGAAGTTGTGGGTGAATTTATTGATGGCTGGAATATTTCGGCTGGTTATTCTCAAT TCACCGCTGAAGATGCCGAAGGCAGTAAAGTGGAGACCACGAGCCCTCGTAAACAGTTTAAACTCTTTACTACCTATCAG TTTGTTGACCATTTACCTGAGTTGACCGTGGGTGGTGGTGTTAACTGGCAGAGCGACAGTTACTCGCAGAGCGGTGGCGT TGTCATTGAGCAGGAGGCATATTCGCTTGTTAACCTGATGGCTCGTTATAATCTAGCGGAAAATATGGATCTGCAACTGA ACCTCGAAAACCTGCTGGATGAAAAATACTATGCCTATATGTCAGCTTCTGGACTTTCATACAGCATATATCACTATGGT ACCCCTAGAAATGTAACTGTTAGTTTTAACTATCGTTTCTAA
Upstream 100 bases:
>100_bases TCAATCCTTAAATATCTCCCATCATGCTTTAACTGCTACTGAATCGTGGCAGGTTTGTTATCTATATCACACAAAATACA AATGAAAACTATTCGTAATA
Downstream 100 bases:
>100_bases GGTTTACTTGCTGCAAACTGGTGGTCACCTAAGGTTGACCACCAGTCCTCATTTTTACCCATTTGCAATTAGCTAACATT AAGATTTATGGTAAGAGTTA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MLPYAYPKDTTEMTMRFNLLPLAAAITLALNPLSVLAGEQSSTETKDQNIEKITVMGKYTVSRTIDTATGLGLSLQETPQ SVSIMTAERIQDQALNTVVDVVNNTVGLSSSKTDNVRNGFMARGFAVQNYQIDGVPLSWSLGGDAGETVSDISLYERVEV VRGATGLLTGAGDPSASINLVRKHADSAELKGYVDVATGSWDKKQITADVSNGLNDSGSVRGRMVAKYVNSDSYQDLYQD RKTILYGVVDSDITENTMLRVGGSYNNNNPKGAMWGALPAMFSDGSATDWDVSATTAADWSRWETTNINYFANLNHYFSN GWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDFQLKGDYQLFNREHQFVAGALYSKQKSYA DTYEPIREDMTGWDSKVVENFYDWRSNTFDEPQWSTDANRQLNMDTEQKGFYAATRLTITDDFKIIAGGRISSWNREGVS YGTSTNFGDDGVFVPYVGALYDINEEHRVYASYTEIFNPQNVTNAYGEYIDPLKGKAYEVGLKSAYLDDRLHTTVALFKI DQDNLATPDGTVTIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNISAGYSQFTAEDAEGSKVETTSPRKQFKLFTTYQ FVDHLPELTVGGGVNWQSDSYSQSGGVVIEQEAYSLVNLMARYNLAENMDLQLNLENLLDEKYYAYMSASGLSYSIYHYG TPRNVTVSFNYRF
Sequences:
>Translated_733_residues MLPYAYPKDTTEMTMRFNLLPLAAAITLALNPLSVLAGEQSSTETKDQNIEKITVMGKYTVSRTIDTATGLGLSLQETPQ SVSIMTAERIQDQALNTVVDVVNNTVGLSSSKTDNVRNGFMARGFAVQNYQIDGVPLSWSLGGDAGETVSDISLYERVEV VRGATGLLTGAGDPSASINLVRKHADSAELKGYVDVATGSWDKKQITADVSNGLNDSGSVRGRMVAKYVNSDSYQDLYQD RKTILYGVVDSDITENTMLRVGGSYNNNNPKGAMWGALPAMFSDGSATDWDVSATTAADWSRWETTNINYFANLNHYFSN GWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDFQLKGDYQLFNREHQFVAGALYSKQKSYA DTYEPIREDMTGWDSKVVENFYDWRSNTFDEPQWSTDANRQLNMDTEQKGFYAATRLTITDDFKIIAGGRISSWNREGVS YGTSTNFGDDGVFVPYVGALYDINEEHRVYASYTEIFNPQNVTNAYGEYIDPLKGKAYEVGLKSAYLDDRLHTTVALFKI DQDNLATPDGTVTIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNISAGYSQFTAEDAEGSKVETTSPRKQFKLFTTYQ FVDHLPELTVGGGVNWQSDSYSQSGGVVIEQEAYSLVNLMARYNLAENMDLQLNLENLLDEKYYAYMSASGLSYSIYHYG TPRNVTVSFNYRF >Mature_733_residues MLPYAYPKDTTEMTMRFNLLPLAAAITLALNPLSVLAGEQSSTETKDQNIEKITVMGKYTVSRTIDTATGLGLSLQETPQ SVSIMTAERIQDQALNTVVDVVNNTVGLSSSKTDNVRNGFMARGFAVQNYQIDGVPLSWSLGGDAGETVSDISLYERVEV VRGATGLLTGAGDPSASINLVRKHADSAELKGYVDVATGSWDKKQITADVSNGLNDSGSVRGRMVAKYVNSDSYQDLYQD RKTILYGVVDSDITENTMLRVGGSYNNNNPKGAMWGALPAMFSDGSATDWDVSATTAADWSRWETTNINYFANLNHYFSN GWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDFQLKGDYQLFNREHQFVAGALYSKQKSYA DTYEPIREDMTGWDSKVVENFYDWRSNTFDEPQWSTDANRQLNMDTEQKGFYAATRLTITDDFKIIAGGRISSWNREGVS YGTSTNFGDDGVFVPYVGALYDINEEHRVYASYTEIFNPQNVTNAYGEYIDPLKGKAYEVGLKSAYLDDRLHTTVALFKI DQDNLATPDGTVTIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNISAGYSQFTAEDAEGSKVETTSPRKQFKLFTTYQ FVDHLPELTVGGGVNWQSDSYSQSGGVVIEQEAYSLVNLMARYNLAENMDLQLNLENLLDEKYYAYMSASGLSYSIYHYG TPRNVTVSFNYRF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=739, Percent_Identity=36.8064952638701, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1786344, Length=779, Percent_Identity=23.7483953786906, Blast_Score=117, Evalue=4e-27, Organism=Escherichia coli, GI1787024, Length=340, Percent_Identity=27.3529411764706, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81442; Mature: 81442
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPYAYPKDTTEMTMRFNLLPLAAAITLALNPLSVLAGEQSSTETKDQNIEKITVMGKYT CCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEE VSRTIDTATGLGLSLQETPQSVSIMTAERIQDQALNTVVDVVNNTVGLSSSKTDNVRNGF EEEEEHHHHCCCCCHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC MARGFAVQNYQIDGVPLSWSLGGDAGETVSDISLYERVEVVRGATGLLTGAGDPSASINL EECCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH VRKHADSAELKGYVDVATGSWDKKQITADVSNGLNDSGSVRGRMVAKYVNSDSYQDLYQD EECCCCCCCCCEEEEEECCCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHCCCCHHHHHHC RKTILYGVVDSDITENTMLRVGGSYNNNNPKGAMWGALPAMFSDGSATDWDVSATTAADW CCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCC SRWETTNINYFANLNHYFSNGWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYH CCEEECCEEEEECCCHHHCCCEEEEECCCCEEEEHHHEEEEEECCCCCCCCCCCCCCHHH SHGESNSDNFDFQLKGDYQLFNREHQFVAGALYSKQKSYADTYEPIREDMTGWDSKVVEN CCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FYDWRSNTFDEPQWSTDANRQLNMDTEQKGFYAATRLTITDDFKIIAGGRISSWNREGVS HHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEEECCEEEEECCEECCCCCCCCC YGTSTNFGDDGVFVPYVGALYDINEEHRVYASYTEIFNPQNVTNAYGEYIDPLKGKAYEV CCCCCCCCCCCEECCCCCEEEECCCCCEEEEEHHHHCCCCCHHHHHHHHCCCCCCCEEEE GLKSAYLDDRLHTTVALFKIDQDNLATPDGTVTIDGKPVTNYKAAQGTESTGFELEVVGE CCHHHHHCCHHEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEH FIDGWNISAGYSQFTAEDAEGSKVETTSPRKQFKLFTTYQFVDHLPELTVGGGVNWQSDS HHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHEEEEHHHHHHHCCCCEEECCCCCCCCCC YSQSGGVVIEQEAYSLVNLMARYNLAENMDLQLNLENLLDEKYYAYMSASGLSYSIYHYG CCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCHHHEEEEECCCCEEEEEEEC TPRNVTVSFNYRF CCCEEEEEEEECC >Mature Secondary Structure MLPYAYPKDTTEMTMRFNLLPLAAAITLALNPLSVLAGEQSSTETKDQNIEKITVMGKYT CCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEE VSRTIDTATGLGLSLQETPQSVSIMTAERIQDQALNTVVDVVNNTVGLSSSKTDNVRNGF EEEEEHHHHCCCCCHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC MARGFAVQNYQIDGVPLSWSLGGDAGETVSDISLYERVEVVRGATGLLTGAGDPSASINL EECCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH VRKHADSAELKGYVDVATGSWDKKQITADVSNGLNDSGSVRGRMVAKYVNSDSYQDLYQD EECCCCCCCCCEEEEEECCCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHCCCCHHHHHHC RKTILYGVVDSDITENTMLRVGGSYNNNNPKGAMWGALPAMFSDGSATDWDVSATTAADW CCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCC SRWETTNINYFANLNHYFSNGWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYH CCEEECCEEEEECCCHHHCCCEEEEECCCCEEEEHHHEEEEEECCCCCCCCCCCCCCHHH SHGESNSDNFDFQLKGDYQLFNREHQFVAGALYSKQKSYADTYEPIREDMTGWDSKVVEN CCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FYDWRSNTFDEPQWSTDANRQLNMDTEQKGFYAATRLTITDDFKIIAGGRISSWNREGVS HHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEEECCEEEEECCEECCCCCCCCC YGTSTNFGDDGVFVPYVGALYDINEEHRVYASYTEIFNPQNVTNAYGEYIDPLKGKAYEV CCCCCCCCCCCEECCCCCEEEECCCCCEEEEEHHHHCCCCCHHHHHHHHCCCCCCCEEEE GLKSAYLDDRLHTTVALFKIDQDNLATPDGTVTIDGKPVTNYKAAQGTESTGFELEVVGE CCHHHHHCCHHEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEH FIDGWNISAGYSQFTAEDAEGSKVETTSPRKQFKLFTTYQFVDHLPELTVGGGVNWQSDS HHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHEEEEHHHHHHHCCCCEEECCCCCCCCCC YSQSGGVVIEQEAYSLVNLMARYNLAENMDLQLNLENLLDEKYYAYMSASGLSYSIYHYG CCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCHHHEEEEECCCCEEEEEEEC TPRNVTVSFNYRF CCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]