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The map label for this gene is ydgI [H]

Identifier: 120596922

GI number: 120596922

Start: 108404

End: 109801

Strand: Direct

Name: ydgI [H]

Synonym: Sputw3181_0089

Alternate gene names: 120596922

Gene position: 108404-109801 (Clockwise)

Preceding gene: 120596921

Following gene: 120596923

Centisome position: 2.3

GC content: 62.37

Gene sequence:

>1398_bases
ATGAAAGAGAGCAAAATAGGCCTCTGGTCCCTCACTGCGCTGGTGTTCAGCTCCATGGTGGGGGCGGGCATCTTCAGCTT
GCCCCAGAACATGGCCGAAGTGGCCGGTGCTCGCGCCGTGCTGATTGGCTGGGGCGTAACCGGGGTGGGCATACTGGCGC
TCGCCGCGAGTTTTCTCTACCTGTCGCGGCTAAGACCGGATCTCGATGGCGGCATCTACAGCTATGCCCGCGCAGGCTTT
GGCGATCTGGTGGGTTTTTTCTCCGCCTGGGGCTACTGGCTGTGCGCCACCATAGGTGTGGTGGGTTACCTGGTGATCGC
GTTCGCCGCCCTTGGCAGCTTCGTCGATACCCCTGAGCAGATCTGGTTTGGTGACGGCAATACCCTGGCGGCTTTTATCG
GCGAGTCCTGCATCCTCTGGGCGGTGCATCTGCTGGTGGCCCGTGGCGTGCAACAGGCGGCCCTGTTCAATCTGGTCGCA
ACCCTGGCCAAGAGCCTGCCGCTGCTGCTGTTCATCCTGTTCGCCTGCTACTGGTTTGACCCTGTGACCTTTGCGGCGGA
TCAGGGGGGCAGCACGCTTGCTGTGCCGGTCTCCGAGCAGGTGCGCAACACCATGCTGATCACCCTCTGGGTCTTTACCG
GCATCGAAGGGGCCGCCGTCCTGTCGGCCCGTGCGAGAAACAAGCGGGACGTGGGCACGGCCACAGTGCTCGGGGTAGTG
CTGGCGTTGCTGCTTTATGTGCTCATCTCGGTACTGGCGCTGGGGATATTGAGTCGCCCCGAGCTCGCGGCCCTGCCCAA
TCCCTCCATGGCGGGGCTGATGGCCCAGATGACAGGCTCCTGGGGCAAGGTGCTGATCAGTGTCGGCCTCATCGTCTCTG
TACTCGCTTCTTACGTGAGCTGGACCCTGTTCTCGGCAGAGGTGCCCTACAGCGCTGCCCGCCACGGTGCCTTCCCGGCC
ATCTTCCGACGCCAGAATCGCAACGGCACCCCCATAGCGTCGCTGTGGCTCACCAGCCTGACGGTGCAGGGCTGCCTGCT
GCTGGTGTGGCTGCTCGGCAAGGGGTATACCAACCTGCTGCTCATCTCCACCTCCATGATACTGGTGCCCTATCTGCTGA
TCGGCCTGTTCCTGCTCAAGCTTTCCTTGAGTGGCGAGGGCAATGGCCTGATGCGGACAGTGGCACTGGTGTCGAGCGGT
TATGGCCTCTGGCTGCTCTATGCCGCCGGTGTGGAATACCTGCTGCTCTCCTTGCTGCTGTACGGGCCGGGCCTGCTGCT
GTTTCTCTACAGCCGCCGACAGCTTGGTGACCATCAGCGGCTCAGTGGTCGCGAACGACTGCTGGCTGGGATAACCCTGG
TGAGCCTTATTCCCGCACTCTGGTCATTTGGTTTTTGA

Upstream 100 bases:

>100_bases
GCGCTGGCGCGCCGTGGGGGCCTCTCTCATCGGCGGCTGCTGCGGCATCGGCCCCGAGCATATTCAGGCACTGGCCAGCC
GGTTGCGCTAAGGAGAGCAC

Downstream 100 bases:

>100_bases
ATGACAATGGATGGCGATGAGATATTAATCGTCATCTTTTGGGTTTTTTAGCGATAAATGATTGTGGATACCTCACGGAT
CCCTTGTTCTTATTTATCCT

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKESKIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGARAVLIGWGVTGVGILALAASFLYLSRLRPDLDGGIYSYARAGF
GDLVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPEQIWFGDGNTLAAFIGESCILWAVHLLVARGVQQAALFNLVA
TLAKSLPLLLFILFACYWFDPVTFAADQGGSTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARARNKRDVGTATVLGVV
LALLLYVLISVLALGILSRPELAALPNPSMAGLMAQMTGSWGKVLISVGLIVSVLASYVSWTLFSAEVPYSAARHGAFPA
IFRRQNRNGTPIASLWLTSLTVQGCLLLVWLLGKGYTNLLLISTSMILVPYLLIGLFLLKLSLSGEGNGLMRTVALVSSG
YGLWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLGDHQRLSGRERLLAGITLVSLIPALWSFGF

Sequences:

>Translated_465_residues
MKESKIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGARAVLIGWGVTGVGILALAASFLYLSRLRPDLDGGIYSYARAGF
GDLVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPEQIWFGDGNTLAAFIGESCILWAVHLLVARGVQQAALFNLVA
TLAKSLPLLLFILFACYWFDPVTFAADQGGSTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARARNKRDVGTATVLGVV
LALLLYVLISVLALGILSRPELAALPNPSMAGLMAQMTGSWGKVLISVGLIVSVLASYVSWTLFSAEVPYSAARHGAFPA
IFRRQNRNGTPIASLWLTSLTVQGCLLLVWLLGKGYTNLLLISTSMILVPYLLIGLFLLKLSLSGEGNGLMRTVALVSSG
YGLWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLGDHQRLSGRERLLAGITLVSLIPALWSFGF
>Mature_465_residues
MKESKIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGARAVLIGWGVTGVGILALAASFLYLSRLRPDLDGGIYSYARAGF
GDLVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPEQIWFGDGNTLAAFIGESCILWAVHLLVARGVQQAALFNLVA
TLAKSLPLLLFILFACYWFDPVTFAADQGGSTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARARNKRDVGTATVLGVV
LALLLYVLISVLALGILSRPELAALPNPSMAGLMAQMTGSWGKVLISVGLIVSVLASYVSWTLFSAEVPYSAARHGAFPA
IFRRQNRNGTPIASLWLTSLTVQGCLLLVWLLGKGYTNLLLISTSMILVPYLLIGLFLLKLSLSGEGNGLMRTVALVSSG
YGLWLLYAAGVEYLLLSLLLYGPGLLLFLYSRRQLGDHQRLSGRERLLAGITLVSLIPALWSFGF

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=459, Percent_Identity=58.6056644880174, Blast_Score=522, Evalue=1e-149,
Organism=Escherichia coli, GI2367353, Length=429, Percent_Identity=30.0699300699301, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1786908, Length=428, Percent_Identity=26.6355140186916, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790575, Length=455, Percent_Identity=26.1538461538462, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49761; Mature: 49761

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKESKIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGARAVLIGWGVTGVGILALAASFLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
LSRLRPDLDGGIYSYARAGFGDLVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPEQ
HHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IWFGDGNTLAAFIGESCILWAVHLLVARGVQQAALFNLVATLAKSLPLLLFILFACYWFD
EEECCCCCHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVTFAADQGGSTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARARNKRDVGTATVLGVV
CHHEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
LALLLYVLISVLALGILSRPELAALPNPSMAGLMAQMTGSWGKVLISVGLIVSVLASYVS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
WTLFSAEVPYSAARHGAFPAIFRRQNRNGTPIASLWLTSLTVQGCLLLVWLLGKGYTNLL
HHHHCCCCCHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LISTSMILVPYLLIGLFLLKLSLSGEGNGLMRTVALVSSGYGLWLLYAAGVEYLLLSLLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YGPGLLLFLYSRRQLGDHQRLSGRERLLAGITLVSLIPALWSFGF
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKESKIGLWSLTALVFSSMVGAGIFSLPQNMAEVAGARAVLIGWGVTGVGILALAASFLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
LSRLRPDLDGGIYSYARAGFGDLVGFFSAWGYWLCATIGVVGYLVIAFAALGSFVDTPEQ
HHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IWFGDGNTLAAFIGESCILWAVHLLVARGVQQAALFNLVATLAKSLPLLLFILFACYWFD
EEECCCCCHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVTFAADQGGSTLAVPVSEQVRNTMLITLWVFTGIEGAAVLSARARNKRDVGTATVLGVV
CHHEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH
LALLLYVLISVLALGILSRPELAALPNPSMAGLMAQMTGSWGKVLISVGLIVSVLASYVS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
WTLFSAEVPYSAARHGAFPAIFRRQNRNGTPIASLWLTSLTVQGCLLLVWLLGKGYTNLL
HHHHCCCCCHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LISTSMILVPYLLIGLFLLKLSLSGEGNGLMRTVALVSSGYGLWLLYAAGVEYLLLSLLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
YGPGLLLFLYSRRQLGDHQRLSGRERLLAGITLVSLIPALWSFGF
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]