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The map label for this gene is accD [H]

Identifier: 119947259

GI number: 119947259

Start: 4469268

End: 4470410

Strand: Reverse

Name: accD [H]

Synonym: Ping_3657

Alternate gene names: 119947259

Gene position: 4470410-4469268 (Counterclockwise)

Preceding gene: 119947260

Following gene: 119947258

Centisome position: 98.04

GC content: 43.57

Gene sequence:

>1143_bases
ATGCAACCAATTAAACTTTTTTTTGAAGGAAATGAAACCATATCGGACTCAGTGCGTGTTGGTAATGTAGGGTCGGGTGA
TCTTGAAGTTATTTTTTTACCCGCTTCGAGCAATAAAACCCAGGTGGTTATTAACACCTCAGTGAATAACCGTCAGCAAT
TATGGTCCGATATTCTGGATAAATGTTTGGGCAAAGAAAGGCTGCTGATGGATGTGTTGATCAATGATTTTGCGGCGACA
CCCGGGGTTGTTTCACTGCGTGTAGAGCAAGCCCTGGAACAAATTAAACAGGGGAAAAACCCACCCGTTTCCGGTAAATT
TGGTATTTCTTTTGTCGAACTAAGCAGCAGAGAAAGAGCACATTATTTATTAGATGATGGTTCACAAAGAGAAGTATTAG
GGCCGGAGAAAAACCTCACTTCCCCCTGGTTAATTCCTCAGGGCATAGTGCCGCAGTCCGATGATGGTTGTATTGTTATG
AAAGGAACAATGAATTCCCTTAATACAGTAGTGATTGGTATTGAGGGCGCTTTTCAAGGCGGCGCTATTGGTGAAGTATC
AGGTGCTAAAATGGCTGCGGCATTAGATCTTGCCCTGCAAGATAACCAGCAGGGAAAAACCACACAAGTTGTCTTGCTGC
TGGAAACGGGGGGAGTGCGCTTACAGGAAGCTAATTTAGGATTAGCGGCCATTGCCGATATTCATTCTTCTATTGTGGCA
TTGCGTGAGCATATCAATGTGATCGGTGTTATTGCCGGTAGTGTTGGCTGTTTTGGTGGTATGTCCATGGCTGCGGCATT
GTGCAGTACCTTAATTGTGACTCAAGAAGCACGTTTAGGATTGAATGGTCCTGCGGTTATTGAACAAGAAGCTGGTATTG
AAGAGTATGACTCGCGCAATCGACCCTTTATTTGGAGTATTACCGGCGGCGCGCAGCGTCACGCCAGTGGTTTTGCAGAT
TATTTCAGCCAAGATAATGCCGACGAGATTAAGCAGGCTGTTATTCAAAGGCAAAATAGTGATTTGAAAACAGTGCGTTG
TGAGCAGATAGAACATTACTTGTCGATCTTTAATAAGATCAATAAACAAGATCAATCTACCCCGGAATTAGTAAGAAAGT
ATTTTTCTGAAGGAGCGGCATAA

Upstream 100 bases:

>100_bases
ATGATTGAAGGCAATCTTTCACCAGGTGGTGCGGCTGATTTGTTATCGGCAACGTTATTTATTGATGCACTAGAAAATAA
ATTAATTTCGAGGTTCCACT

Downstream 100 bases:

>100_bases
TGAGTGAACGAGGTTTAATATGGCTAAACAGTTTAACCAATGAAGGGTCATTAATAACGGGTTTTATCCCTTCGGTTAAA
GTCATCGATAGCGAAATCAA

Product: Acetyl-CoA carboxylase beta subunit-like protein

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQPIKLFFEGNETISDSVRVGNVGSGDLEVIFLPASSNKTQVVINTSVNNRQQLWSDILDKCLGKERLLMDVLINDFAAT
PGVVSLRVEQALEQIKQGKNPPVSGKFGISFVELSSRERAHYLLDDGSQREVLGPEKNLTSPWLIPQGIVPQSDDGCIVM
KGTMNSLNTVVIGIEGAFQGGAIGEVSGAKMAAALDLALQDNQQGKTTQVVLLLETGGVRLQEANLGLAAIADIHSSIVA
LREHINVIGVIAGSVGCFGGMSMAAALCSTLIVTQEARLGLNGPAVIEQEAGIEEYDSRNRPFIWSITGGAQRHASGFAD
YFSQDNADEIKQAVIQRQNSDLKTVRCEQIEHYLSIFNKINKQDQSTPELVRKYFSEGAA

Sequences:

>Translated_380_residues
MQPIKLFFEGNETISDSVRVGNVGSGDLEVIFLPASSNKTQVVINTSVNNRQQLWSDILDKCLGKERLLMDVLINDFAAT
PGVVSLRVEQALEQIKQGKNPPVSGKFGISFVELSSRERAHYLLDDGSQREVLGPEKNLTSPWLIPQGIVPQSDDGCIVM
KGTMNSLNTVVIGIEGAFQGGAIGEVSGAKMAAALDLALQDNQQGKTTQVVLLLETGGVRLQEANLGLAAIADIHSSIVA
LREHINVIGVIAGSVGCFGGMSMAAALCSTLIVTQEARLGLNGPAVIEQEAGIEEYDSRNRPFIWSITGGAQRHASGFAD
YFSQDNADEIKQAVIQRQNSDLKTVRCEQIEHYLSIFNKINKQDQSTPELVRKYFSEGAA
>Mature_380_residues
MQPIKLFFEGNETISDSVRVGNVGSGDLEVIFLPASSNKTQVVINTSVNNRQQLWSDILDKCLGKERLLMDVLINDFAAT
PGVVSLRVEQALEQIKQGKNPPVSGKFGISFVELSSRERAHYLLDDGSQREVLGPEKNLTSPWLIPQGIVPQSDDGCIVM
KGTMNSLNTVVIGIEGAFQGGAIGEVSGAKMAAALDLALQDNQQGKTTQVVLLLETGGVRLQEANLGLAAIADIHSSIVA
LREHINVIGVIAGSVGCFGGMSMAAALCSTLIVTQEARLGLNGPAVIEQEAGIEEYDSRNRPFIWSITGGAQRHASGFAD
YFSQDNADEIKQAVIQRQNSDLKTVRCEQIEHYLSIFNKINKQDQSTPELVRKYFSEGAA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=198, Percent_Identity=30.8080808080808, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 40984; Mature: 40984

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIKLFFEGNETISDSVRVGNVGSGDLEVIFLPASSNKTQVVINTSVNNRQQLWSDILD
CCCEEEEEECCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHH
KCLGKERLLMDVLINDFAATPGVVSLRVEQALEQIKQGKNPPVSGKFGISFVELSSRERA
HHHCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCE
HYLLDDGSQREVLGPEKNLTSPWLIPQGIVPQSDDGCIVMKGTMNSLNTVVIGIEGAFQG
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCC
GAIGEVSGAKMAAALDLALQDNQQGKTTQVVLLLETGGVRLQEANLGLAAIADIHSSIVA
CCCCCCCCCHHHHHEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHH
LREHINVIGVIAGSVGCFGGMSMAAALCSTLIVTQEARLGLNGPAVIEQEAGIEEYDSRN
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCC
RPFIWSITGGAQRHASGFADYFSQDNADEIKQAVIQRQNSDLKTVRCEQIEHYLSIFNKI
CCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
NKQDQSTPELVRKYFSEGAA
CCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQPIKLFFEGNETISDSVRVGNVGSGDLEVIFLPASSNKTQVVINTSVNNRQQLWSDILD
CCCEEEEEECCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHH
KCLGKERLLMDVLINDFAATPGVVSLRVEQALEQIKQGKNPPVSGKFGISFVELSSRERA
HHHCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCE
HYLLDDGSQREVLGPEKNLTSPWLIPQGIVPQSDDGCIVMKGTMNSLNTVVIGIEGAFQG
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCC
GAIGEVSGAKMAAALDLALQDNQQGKTTQVVLLLETGGVRLQEANLGLAAIADIHSSIVA
CCCCCCCCCHHHHHEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHH
LREHINVIGVIAGSVGCFGGMSMAAALCSTLIVTQEARLGLNGPAVIEQEAGIEEYDSRN
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCC
RPFIWSITGGAQRHASGFADYFSQDNADEIKQAVIQRQNSDLKTVRCEQIEHYLSIFNKI
CCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
NKQDQSTPELVRKYFSEGAA
CCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA