| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947258
Identifier: 119947258
GI number: 119947258
Start: 4468474
End: 4469268
Strand: Reverse
Name: 119947258
Synonym: Ping_3656
Alternate gene names: NA
Gene position: 4469268-4468474 (Counterclockwise)
Preceding gene: 119947259
Following gene: 119947257
Centisome position: 98.02
GC content: 44.53
Gene sequence:
>795_bases ATGAGTGAACGAGGTTTAATATGGCTAAACAGTTTAACCAATGAAGGGTCATTAATAACGGGTTTTATCCCTTCGGTTAA AGTCATCGATAGCGAAATCAATGGCACTAAAGCGCGTTTTATCAGCGTAGTAAAAGATTCAGAGAATGCCTTTGTACGTG CACGTAAAGGTGAGGTCGGCTTACTTGAAGGCTGGAATATTGCTAAAGCCGTACAGGAGGTGGTTGAAAAAGATGTGGGC AGCATTTACAAAACGGCCATTATTGCTGTGGTTGATGTCTCTTCACAGGCCTATGGCCGACGTGAAGAAGCCTATGGCAT TCACCTTGCGTTAGCAGCTGCAGTTAATGCTTATGCGCAGGCGCGTAATGCAGGTCATGCCATTATTGCATTAATTGTGG GTAAAGCCATGTCAGGAGGACTGCTTGCCCATGGTTATCAAGCTTCCCGAATCATCGCATTAAATGATGATGCCTGTATG GTTCACGCTATGAGTAAGGAGTCCGCCGCTCGTGTCACGATGCGCAGTGTTGAGCAATTAGAAGCATTAGCAGAAAAAAT TCCAGCAATGGCATACGATATTAATAACTATAATCGCTTAGGTCTGTTATCTAATCTACTGGATGTTAGTAATGCGGATA ACCCGACGCTTGATGACACCCATATTGTCCAGCAGGCCTTGGCGGATGCATTACAGGATATCCAGAATAACGGTAATGAT TTGAGCTGTCGTTTACATGGAGAAGGGCGTAAGGCAACAAAAAATGTGCGTCAGCTGATGCAAGCTGACTGGTAA
Upstream 100 bases:
>100_bases AGCAGATAGAACATTACTTGTCGATCTTTAATAAGATCAATAAACAAGATCAATCTACCCCGGAATTAGTAAGAAAGTAT TTTTCTGAAGGAGCGGCATA
Downstream 100 bases:
>100_bases ATAATAAGATGCTTACCGTTCTGTAAGCATCTATTCCTTAGCGTTTATGTATTTAAACTCCAATAAGGTGCAGAGAATGC AGGTTTCACTTTATCAGCCC
Product: malonate decarboxylase gamma subunit
Products: NA
Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Beta Subunit; LOW QUALITY PROTEIN Malonate Decarboxylase Gamma Subunit; Malonate Decarboxylase Subunit Beta/Gamma; Beta Subunit Of Malonate Decarboxylase; Subunit Beta Of Malonate Decarboxylase
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSERGLIWLNSLTNEGSLITGFIPSVKVIDSEINGTKARFISVVKDSENAFVRARKGEVGLLEGWNIAKAVQEVVEKDVG SIYKTAIIAVVDVSSQAYGRREEAYGIHLALAAAVNAYAQARNAGHAIIALIVGKAMSGGLLAHGYQASRIIALNDDACM VHAMSKESAARVTMRSVEQLEALAEKIPAMAYDINNYNRLGLLSNLLDVSNADNPTLDDTHIVQQALADALQDIQNNGND LSCRLHGEGRKATKNVRQLMQADW
Sequences:
>Translated_264_residues MSERGLIWLNSLTNEGSLITGFIPSVKVIDSEINGTKARFISVVKDSENAFVRARKGEVGLLEGWNIAKAVQEVVEKDVG SIYKTAIIAVVDVSSQAYGRREEAYGIHLALAAAVNAYAQARNAGHAIIALIVGKAMSGGLLAHGYQASRIIALNDDACM VHAMSKESAARVTMRSVEQLEALAEKIPAMAYDINNYNRLGLLSNLLDVSNADNPTLDDTHIVQQALADALQDIQNNGND LSCRLHGEGRKATKNVRQLMQADW >Mature_263_residues SERGLIWLNSLTNEGSLITGFIPSVKVIDSEINGTKARFISVVKDSENAFVRARKGEVGLLEGWNIAKAVQEVVEKDVGS IYKTAIIAVVDVSSQAYGRREEAYGIHLALAAAVNAYAQARNAGHAIIALIVGKAMSGGLLAHGYQASRIIALNDDACMV HAMSKESAARVTMRSVEQLEALAEKIPAMAYDINNYNRLGLLSNLLDVSNADNPTLDDTHIVQQALADALQDIQNNGNDL SCRLHGEGRKATKNVRQLMQADW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28515; Mature: 28384
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERGLIWLNSLTNEGSLITGFIPSVKVIDSEINGTKARFISVVKDSENAFVRARKGEVG CCCCCEEEEECCCCCCCEEEECCCCEEEECCCCCCCHHHEEEEEECCCCCEEEEECCCEE LLEGWNIAKAVQEVVEKDVGSIYKTAIIAVVDVSSQAYGRREEAYGIHLALAAAVNAYAQ EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCHHHHHHHHHHHHHHHHHHH ARNAGHAIIALIVGKAMSGGLLAHGYQASRIIALNDDACMVHAMSKESAARVTMRSVEQL HCCCCHHEEEHHHHHHCCCCEEECCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHH EALAEKIPAMAYDINNYNRLGLLSNLLDVSNADNPTLDDTHIVQQALADALQDIQNNGND HHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE LSCRLHGEGRKATKNVRQLMQADW EEEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure SERGLIWLNSLTNEGSLITGFIPSVKVIDSEINGTKARFISVVKDSENAFVRARKGEVG CCCCEEEEECCCCCCCEEEECCCCEEEECCCCCCCHHHEEEEEECCCCCEEEEECCCEE LLEGWNIAKAVQEVVEKDVGSIYKTAIIAVVDVSSQAYGRREEAYGIHLALAAAVNAYAQ EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCHHHHHHHHHHHHHHHHHHH ARNAGHAIIALIVGKAMSGGLLAHGYQASRIIALNDDACMVHAMSKESAARVTMRSVEQL HCCCCHHEEEHHHHHHCCCCEEECCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHH EALAEKIPAMAYDINNYNRLGLLSNLLDVSNADNPTLDDTHIVQQALADALQDIQNNGND HHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE LSCRLHGEGRKATKNVRQLMQADW EEEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA