Click here to switch to the map view.

The map label for this gene is lafT [H]

Identifier: 119947182

GI number: 119947182

Start: 4396405

End: 4397268

Strand: Reverse

Name: lafT [H]

Synonym: Ping_3580

Alternate gene names: 119947182

Gene position: 4397268-4396405 (Counterclockwise)

Preceding gene: 119947183

Following gene: 119947181

Centisome position: 96.44

GC content: 40.74

Gene sequence:

>864_bases
ATGATCCGGTTAGCAGGCCTAGTTTTTATTATGTTTTGCCTATTTGGGGGTTTCATGATTGTTGGCGGGAATCTAAAGTT
GTTATGGAAACCCACTGAAATTTTGATTATTTTTGGTGCCGGGTCAGGCGCGTTAATTGTAGGCTCCAGTAAAAACTGCC
TGATCTTGATAACCTCTCAGCTCAAAGATGTCTTTACTGTTAATCCCTACAGCAAAGAATTCTACCGGCAGCTGTTAAGT
CTCCATTATCAGCTGATGCGTGTAAAAAAAATGCCTTCCGGTGCGAAAGTGCTTGAAAGTCATGTGGAAGATTATGAAAA
TAGCAGTATTTTCAATCAATACCCTTTAGTCTTACGCAATGATTTGTTGGTCCATTTTATCGTTGATAATTTCAGAATGA
CCATTTCAAGCCTCGTTGCCGCACATGAAATCGATGCTACTTTAGAGAGTGAAATTGAGGTGATTACATCGGAGCTGCTT
GAACCTGCGGTGGCGCTAAAAAAATTAGCAGATTCTTTACCCGGGCTGGGAGTCTTAGGTGCAGTAATGGGAATTATACT
GACGATGCAGTCCATTGACACTGATATTGCAATGATAGGATCGAATATTGCGACCGCATTAATTGGTACCTTTTTAGGTG
TTTTTGGCTGTTACTGTCTGTTTGATCCGCTTAGCTGCGCAGTGAAAAGTAACGTGATGAAATCGATTGTGCCCTTTGAA
GTTGTGAAACAAATACTGGTTGCGCATGTCTCTAATCGATCTCCCCTTTTATCCATAGACTCAGGAAGACGTGCGATTGA
AATAGATGAAAAACCGGCCTTTAAAATAATAGAAGAATGGGCAGATCAATTAGATAAGCCTTAG

Upstream 100 bases:

>100_bases
TGGCATTAGCGACTAATAATAATTTCTCCCGAATCAATAAAATCCAGCGAGAGGCTCATCGAAAATTGACATATTTAGTT
GTAAATAAAGGGGGTTTATT

Downstream 100 bases:

>100_bases
GAAAGCATAAAAATAAGCCATTAGAATAGAGGGAATTAAGATAATAGCAAAGTGGGCAGGTCAATCAGATTCGGTAAAAA
AGGTAAGGGAAAATGTACGA

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQLKDVFTVNPYSKEFYRQLLS
LHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRNDLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELL
EPAVALKKLADSLPGLGVLGAVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE
VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLDKP

Sequences:

>Translated_287_residues
MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQLKDVFTVNPYSKEFYRQLLS
LHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRNDLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELL
EPAVALKKLADSLPGLGVLGAVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE
VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLDKP
>Mature_287_residues
MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQLKDVFTVNPYSKEFYRQLLS
LHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRNDLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELL
EPAVALKKLADSLPGLGVLGAVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE
VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLDKP

Specific function: Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=287, Percent_Identity=33.7979094076655, Blast_Score=177, Evalue=6e-46,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR022522
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 31556; Mature: 31556

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQ
CCHHHHHHHHHHHHHCCEEEECCCEEEEEECCEEEEEEECCCCEEEEECCCCEEEEEECH
LKDVFTVNPYSKEFYRQLLSLHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRN
HHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHH
DLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELLEPAVALKKLADSLPGLGVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLDKP
HHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRLAGLVFIMFCLFGGFMIVGGNLKLLWKPTEILIIFGAGSGALIVGSSKNCLILITSQ
CCHHHHHHHHHHHHHCCEEEECCCEEEEEECCEEEEEEECCCCEEEEECCCCEEEEEECH
LKDVFTVNPYSKEFYRQLLSLHYQLMRVKKMPSGAKVLESHVEDYENSSIFNQYPLVLRN
HHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHH
DLLVHFIVDNFRMTISSLVAAHEIDATLESEIEVITSELLEPAVALKKLADSLPGLGVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AVMGIILTMQSIDTDIAMIGSNIATALIGTFLGVFGCYCLFDPLSCAVKSNVMKSIVPFE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VVKQILVAHVSNRSPLLSIDSGRRAIEIDEKPAFKIIEEWADQLDKP
HHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]