| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119947141
Identifier: 119947141
GI number: 119947141
Start: 4357080
End: 4357643
Strand: Direct
Name: 119947141
Synonym: Ping_3539
Alternate gene names: NA
Gene position: 4357080-4357643 (Clockwise)
Preceding gene: 119947133
Following gene: 119947144
Centisome position: 95.56
GC content: 37.59
Gene sequence:
>564_bases ATGTCCAGCAAAGTATATATTACTGCCCAACAACTACTTGAAGACTCATTTCGTCTTGCCGCACAAGTCTATGATAGCGG TTTTCGTCCACAATTTATTGTTGGTATTTGGCGAGGAGGAGCACCTATTGGTATTGCAGTACAGGAATACTTTGATTATA AAAAAGTAGATACCGACCATATTGCAGTGCGTACCTCTTCCTATTATGGTATTGGCAAACAAAGTAAAACCATAAAAGTT CATGGCCTGCATTATATTATTGAAAATGCCAATGCTGATGATGGCTTATTAATTGTTGATGACGTATTTGACTCAGGCAG AAGTGTGGTGGCATTAGTTGAAAGACTAACAGCAGAAATGCGCTTAAATATGCCAACCGATGTACGCATTGCCACGCCCT ATTACAAACCTAAAAATAAAACCGTTGCCATAGTACCTGATTATTTTATCCATGAATCAGAAGAGTGGTTAGTGTTTCCC CATGAAGTTTCAGGTTTAAGCATTGAAGAAATCGTTTCCGGTAAAAGTGATTTTGAAAATATTAAGCATTTATTCACCGA ATGA
Upstream 100 bases:
>100_bases AGTTTTATGTAAAAAAATGCAATAAACAGGATCCAGGTTATTGTTATTTTTTCCTGTTGCTCTAAACTTTGCGCAAAAAT TCACTCGCAGAGGTTATTAA
Downstream 100 bases:
>100_bases ATCTGATTTTCCGCTATAAATAACACTTTATTTATATAAAGTATTATTTATAGCCCTCGTAAGTAATATAACCAGCTGTT TTATCCAATAAATCTGAATA
Product: hypoxanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Hypoxanthine-Guanine Phosphoribosyltransferase; Hypoxanthine Phosphoribosyltransferase; Phosphoribosyl Transferase Domain Protein; Purine Phosphoribosyltransferase
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSSKVYITAQQLLEDSFRLAAQVYDSGFRPQFIVGIWRGGAPIGIAVQEYFDYKKVDTDHIAVRTSSYYGIGKQSKTIKV HGLHYIIENANADDGLLIVDDVFDSGRSVVALVERLTAEMRLNMPTDVRIATPYYKPKNKTVAIVPDYFIHESEEWLVFP HEVSGLSIEEIVSGKSDFENIKHLFTE
Sequences:
>Translated_187_residues MSSKVYITAQQLLEDSFRLAAQVYDSGFRPQFIVGIWRGGAPIGIAVQEYFDYKKVDTDHIAVRTSSYYGIGKQSKTIKV HGLHYIIENANADDGLLIVDDVFDSGRSVVALVERLTAEMRLNMPTDVRIATPYYKPKNKTVAIVPDYFIHESEEWLVFP HEVSGLSIEEIVSGKSDFENIKHLFTE >Mature_186_residues SSKVYITAQQLLEDSFRLAAQVYDSGFRPQFIVGIWRGGAPIGIAVQEYFDYKKVDTDHIAVRTSSYYGIGKQSKTIKVH GLHYIIENANADDGLLIVDDVFDSGRSVVALVERLTAEMRLNMPTDVRIATPYYKPKNKTVAIVPDYFIHESEEWLVFPH EVSGLSIEEIVSGKSDFENIKHLFTE
Specific function: Unknown
COG id: COG2236
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21149; Mature: 21018
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKVYITAQQLLEDSFRLAAQVYDSGFRPQFIVGIWRGGAPIGIAVQEYFDYKKVDTDH CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHCCCCCCCCCE IAVRTSSYYGIGKQSKTIKVHGLHYIIENANADDGLLIVDDVFDSGRSVVALVERLTAEM EEEEECCEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RLNMPTDVRIATPYYKPKNKTVAIVPDYFIHESEEWLVFPHEVSGLSIEEIVSGKSDFEN CCCCCCCEEEECCCCCCCCCEEEEECHHHEECCCCEEEEECCCCCCCHHHHHCCCCHHHH IKHLFTE HHHHHCC >Mature Secondary Structure SSKVYITAQQLLEDSFRLAAQVYDSGFRPQFIVGIWRGGAPIGIAVQEYFDYKKVDTDH CCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHCCCCCCCCCE IAVRTSSYYGIGKQSKTIKVHGLHYIIENANADDGLLIVDDVFDSGRSVVALVERLTAEM EEEEECCEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RLNMPTDVRIATPYYKPKNKTVAIVPDYFIHESEEWLVFPHEVSGLSIEEIVSGKSDFEN CCCCCCCEEEECCCCCCCCCEEEEECHHHEECCCCEEEEECCCCCCCHHHHHCCCCHHHH IKHLFTE HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA