Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119947004

Identifier: 119947004

GI number: 119947004

Start: 4202327

End: 4203070

Strand: Direct

Name: 119947004

Synonym: Ping_3401

Alternate gene names: NA

Gene position: 4202327-4203070 (Clockwise)

Preceding gene: 119947003

Following gene: 119947005

Centisome position: 92.16

GC content: 50.67

Gene sequence:

>744_bases
ATGAAGATAACTAGACCGCGAAACCTGCTGCTACTAGCCGCCTTGCTCTCTGTCACCGGCTGCTTTCCCAGCTGTTCGTA
TTATAATACCATATTTGGTACTAGTGGTACTAATGGCAGTGCAGTTGTGACAGGTCCTGAAACAGGGAAAATTGACAGTG
AGATCACTCTCGACGGAAGTCTAAGCAAGTCTGTTCGTATTCTGGAATGGAGTATCGCAGCACCCAAAGGCAGTAACGTA
ACCAAATGCAACGTCGGAGCTGATGATATCAACAGCACCCGTTACTGCACCTTCACTCCAGATATCAGTGGTGAGTATGA
CATTCAATTAACCGCCCTTGCTGGTGGATCTGGCAAAGATAGTGTTGAAAACCATAAGATTCAGATCGTCGCGAACGTTG
CCACTCGAGTCTCGATCGATTCAACTTCGGAAAAGATTAAGGCTGATGCTCCTCGCACCTTGATGTTGAAAGGTCTGGCC
CACGACCCCGATGACGAACTGATCATGGAATGGTCAGTGCAGGACAATAATTGCGCCGAGCAGCCCAGCTTCAGTGATCC
GGCTAGCCTTTCCACGGAGCTCACGGTGGGCCGACAAGTTGCAGGGCTGGACTGCTCCTTTTCCGCCCAGCTAACAGCTA
GCCCGGTGATAGGGTACGTTGCCGCAGATCGAATTTTAATAACAGTAAAGGCTCCTCTCGTTACGTTCGTTACAGGCGTT
ACGGGCGCTGCCGGCGGCAACTGA

Upstream 100 bases:

>100_bases
GCGAATTTAAGTAAAAGCGTGGCAAATTAAGTCGCTTTTTTACAGATTGATTCTTTATTAAATAAAAAAGTCTACCGTCA
ATTAAAAGGAATTACATACA

Downstream 100 bases:

>100_bases
TTATTTTACCCTGCGCCATATAATCCGGCCCAACTTCGAATATAATTTTGCACATATTAGAGAGCACACCATGAAAATAG
ATAAAAGACAGACGTTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKITRPRNLLLLAALLSVTGCFPSCSYYNTIFGTSGTNGSAVVTGPETGKIDSEITLDGSLSKSVRILEWSIAAPKGSNV
TKCNVGADDINSTRYCTFTPDISGEYDIQLTALAGGSGKDSVENHKIQIVANVATRVSIDSTSEKIKADAPRTLMLKGLA
HDPDDELIMEWSVQDNNCAEQPSFSDPASLSTELTVGRQVAGLDCSFSAQLTASPVIGYVAADRILITVKAPLVTFVTGV
TGAAGGN

Sequences:

>Translated_247_residues
MKITRPRNLLLLAALLSVTGCFPSCSYYNTIFGTSGTNGSAVVTGPETGKIDSEITLDGSLSKSVRILEWSIAAPKGSNV
TKCNVGADDINSTRYCTFTPDISGEYDIQLTALAGGSGKDSVENHKIQIVANVATRVSIDSTSEKIKADAPRTLMLKGLA
HDPDDELIMEWSVQDNNCAEQPSFSDPASLSTELTVGRQVAGLDCSFSAQLTASPVIGYVAADRILITVKAPLVTFVTGV
TGAAGGN
>Mature_247_residues
MKITRPRNLLLLAALLSVTGCFPSCSYYNTIFGTSGTNGSAVVTGPETGKIDSEITLDGSLSKSVRILEWSIAAPKGSNV
TKCNVGADDINSTRYCTFTPDISGEYDIQLTALAGGSGKDSVENHKIQIVANVATRVSIDSTSEKIKADAPRTLMLKGLA
HDPDDELIMEWSVQDNNCAEQPSFSDPASLSTELTVGRQVAGLDCSFSAQLTASPVIGYVAADRILITVKAPLVTFVTGV
TGAAGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25866; Mature: 25866

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITRPRNLLLLAALLSVTGCFPSCSYYNTIFGTSGTNGSAVVTGPETGKIDSEITLDGS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCEEEECCC
LSKSVRILEWSIAAPKGSNVTKCNVGADDINSTRYCTFTPDISGEYDIQLTALAGGSGKD
CCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCC
SVENHKIQIVANVATRVSIDSTSEKIKADAPRTLMLKGLAHDPDDELIMEWSVQDNNCAE
CCCCCEEEEEEEEEEEEEECCCCHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCC
QPSFSDPASLSTELTVGRQVAGLDCSFSAQLTASPVIGYVAADRILITVKAPLVTFVTGV
CCCCCCCCCCCEEEEECCEEECCCCCCCCEEECCCEEEEEECCEEEEEEECCCEEHHHCC
TGAAGGN
CCCCCCC
>Mature Secondary Structure
MKITRPRNLLLLAALLSVTGCFPSCSYYNTIFGTSGTNGSAVVTGPETGKIDSEITLDGS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCEEEECCC
LSKSVRILEWSIAAPKGSNVTKCNVGADDINSTRYCTFTPDISGEYDIQLTALAGGSGKD
CCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCC
SVENHKIQIVANVATRVSIDSTSEKIKADAPRTLMLKGLAHDPDDELIMEWSVQDNNCAE
CCCCCEEEEEEEEEEEEEECCCCHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCC
QPSFSDPASLSTELTVGRQVAGLDCSFSAQLTASPVIGYVAADRILITVKAPLVTFVTGV
CCCCCCCCCCCEEEEECCEEECCCCCCCCEEECCCEEEEEECCEEEEEEECCCEEHHHCC
TGAAGGN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA