| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947005
Identifier: 119947005
GI number: 119947005
Start: 4203141
End: 4203938
Strand: Direct
Name: 119947005
Synonym: Ping_3402
Alternate gene names: NA
Gene position: 4203141-4203938 (Clockwise)
Preceding gene: 119947004
Following gene: 119947007
Centisome position: 92.18
GC content: 47.74
Gene sequence:
>798_bases ATGAAAATAGATAAAAGACAGACGTTTGTATTGATCACTCTGCTTCTGGCCCTTTTCGGCTGTAATAATGATAGCGATTC TTCCGTCATACGCAGTGAAGAAGCCCAAGTAAATGTGGACAAGGGGATAATTGCCCTTAATGAGGGGAACTTTAATGAGG CGCTTGCGCTCCTAGGGAAAGCCGAGGCGCTCTCCAGCTCAGACTCCGAAACACAGCTCCTGCGCGGCAAGGCTTATGCC GGTCGTGCCGGTGTCTCTGTCAAATCAATCACCCAAAGCCTAACCGCTAACCGCACCGATGGCACCACTGAGTTGGCACC TTCCTCATCAAATATCATGGGTATCATGAACTACTACGACGAAAATGAATTCAAGATACGCACCACGGACACCAATAAGG CCCTCGCACTCTTTGTTGAACAGGATCCCTCTCTTGAGAGTCTCTCCAATGATGACCGAGCCACCCTTGCTGCCTTGGCT GCAGTCAACGCCACCCAAAATATCACCCTGATTCTAAAAGGGGATAATCCGATGAAACTAAGCGATCAAGAAATCAAGAA CCTGGTCGAAGACAACTTTGATGCTCAAGCAGACAGCCTTATCAAAGCGACCGATCTGGCGCTTAAGCTTAAATACGAAT TGGTGACAGCAATCACCGCAACCACAGGAAGTATAACCACAGCTGTAGTCGATGCTTCTTTGACAGGTAGCAGCCTCAGT GATCTCGAAAATAGCAAGATGGACAAAGCTGCCTTCACTACTTTTATGCAGACCTTCAATAACGACGACCGTATTTAG
Upstream 100 bases:
>100_bases GGCGTTACGGGCGCTGCCGGCGGCAACTGATTATTTTACCCTGCGCCATATAATCCGGCCCAACTTCGAATATAATTTTG CACATATTAGAGAGCACACC
Downstream 100 bases:
>100_bases CCTATTACGCGCAACTTTAACAAAAAGAGATAGCTCCCATGAGCTATCTCTTCTTGTTTAACTTTTCACTTCCGCAATCT ATTTGATTAAGTTCCTGACC
Product: glucosamine-6-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKIDKRQTFVLITLLLALFGCNNDSDSSVIRSEEAQVNVDKGIIALNEGNFNEALALLGKAEALSSSDSETQLLRGKAYA GRAGVSVKSITQSLTANRTDGTTELAPSSSNIMGIMNYYDENEFKIRTTDTNKALALFVEQDPSLESLSNDDRATLAALA AVNATQNITLILKGDNPMKLSDQEIKNLVEDNFDAQADSLIKATDLALKLKYELVTAITATTGSITTAVVDASLTGSSLS DLENSKMDKAAFTTFMQTFNNDDRI
Sequences:
>Translated_265_residues MKIDKRQTFVLITLLLALFGCNNDSDSSVIRSEEAQVNVDKGIIALNEGNFNEALALLGKAEALSSSDSETQLLRGKAYA GRAGVSVKSITQSLTANRTDGTTELAPSSSNIMGIMNYYDENEFKIRTTDTNKALALFVEQDPSLESLSNDDRATLAALA AVNATQNITLILKGDNPMKLSDQEIKNLVEDNFDAQADSLIKATDLALKLKYELVTAITATTGSITTAVVDASLTGSSLS DLENSKMDKAAFTTFMQTFNNDDRI >Mature_265_residues MKIDKRQTFVLITLLLALFGCNNDSDSSVIRSEEAQVNVDKGIIALNEGNFNEALALLGKAEALSSSDSETQLLRGKAYA GRAGVSVKSITQSLTANRTDGTTELAPSSSNIMGIMNYYDENEFKIRTTDTNKALALFVEQDPSLESLSNDDRATLAALA AVNATQNITLILKGDNPMKLSDQEIKNLVEDNFDAQADSLIKATDLALKLKYELVTAITATTGSITTAVVDASLTGSSLS DLENSKMDKAAFTTFMQTFNNDDRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28524; Mature: 28524
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDKRQTFVLITLLLALFGCNNDSDSSVIRSEEAQVNVDKGIIALNEGNFNEALALLGK CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCEEEEECCCHHHHHHHHHH AEALSSSDSETQLLRGKAYAGRAGVSVKSITQSLTANRTDGTTELAPSSSNIMGIMNYYD HHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEECC ENEFKIRTTDTNKALALFVEQDPSLESLSNDDRATLAALAAVNATQNITLILKGDNPMKL CCCEEEEECCCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCC SDQEIKNLVEDNFDAQADSLIKATDLALKLKYELVTAITATTGSITTAVVDASLTGSSLS CHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCCEEEEEEECCCCCCHHH DLENSKMDKAAFTTFMQTFNNDDRI HHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIDKRQTFVLITLLLALFGCNNDSDSSVIRSEEAQVNVDKGIIALNEGNFNEALALLGK CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCEEEEECCCHHHHHHHHHH AEALSSSDSETQLLRGKAYAGRAGVSVKSITQSLTANRTDGTTELAPSSSNIMGIMNYYD HHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEECC ENEFKIRTTDTNKALALFVEQDPSLESLSNDDRATLAALAAVNATQNITLILKGDNPMKL CCCEEEEECCCCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCC SDQEIKNLVEDNFDAQADSLIKATDLALKLKYELVTAITATTGSITTAVVDASLTGSSLS CHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCCEEEEEEECCCCCCHHH DLENSKMDKAAFTTFMQTFNNDDRI HHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA