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The map label for this gene is yigL [H]

Identifier: 119947003

GI number: 119947003

Start: 4200515

End: 4201315

Strand: Direct

Name: yigL [H]

Synonym: Ping_3398

Alternate gene names: 119947003

Gene position: 4200515-4201315 (Clockwise)

Preceding gene: 119947002

Following gene: 119947004

Centisome position: 92.12

GC content: 41.82

Gene sequence:

>801_bases
ATGTATAAGATTGCAGCATCAGATCTCGATGGCACGCTGTTGACATCGGAACACCAAATCCTTCCCTTTACTAAGCAGGT
ATTGACGCAATTGCATCGCCAGGGCACTGACTTTATTTTTGCAACGGGTCGTCATCATATTGATGTTGCACATATGCGCA
AACAGCTGGGCATTCCGGCATTTATGATCACCTCCAATGGTGCGCGTGTGCATAACTGTGAGAATGAAATAATTTTCAAG
CGCAATATAGCCCCGGATGTCATCAAAGGCATGATTGAAATGTTCCAAAGTGATCCGGAAATTCAAGTTCACCTCTACCG
TAATGATGACTGGCTAATCAGCAAAGAGGACCCAAACAACCCCTGTAAGCAGGAAAATTTTTCATACGGGCTATTTGATA
TAAACAATCCACCGTTGGAAAATATCGCTAAAATTTTTATAAAACACCAGGATCAAAACCACGAAAAACTGGTTATCTGG
GAAAATAAAATCAAAGCGGCATTTCCAGGCCAGACCCATGTCACTTTTTCTTCACCCAATTGTCTTGAAATGATGGATGG
CGGAGTGTCAAAAGGACATGCTCTTGACGCTATTGCTAAAATGAAAGGTTATGCACTAAAAGACTGTATCGCTTTTGGTG
ATGGCATGAATGATTTTGAAATGCTTTCTATGGCGGGAAAAGGTCTGGTAATGGGCAGTGCGCACCATAAAGTAAAATCA
GCGTTACCTAATCATGAAATCATAGGTCACTGCGATGAAGAGGCTGTTGCGCATTATCTTGTCAAACATCTGCTCGAATA
A

Upstream 100 bases:

>100_bases
AATGACTCAGGAAAAATTTGCAAGTTGCTTTTAAAGTTAAGAAGGTTGAGTATTATAGAAAAAGACTCTCCCTCTACTTG
AATCCTAAACGAGAATTTAT

Downstream 100 bases:

>100_bases
GCAAACATAAATTCCGGACATATTTTAATGGTTTTTTACTTTGAGGTAAAACGTGGCAACTTAACGCACAGTTTTTGAAA
ATAAATTATTTATAAAATAA

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MYKIAASDLDGTLLTSEHQILPFTKQVLTQLHRQGTDFIFATGRHHIDVAHMRKQLGIPAFMITSNGARVHNCENEIIFK
RNIAPDVIKGMIEMFQSDPEIQVHLYRNDDWLISKEDPNNPCKQENFSYGLFDINNPPLENIAKIFIKHQDQNHEKLVIW
ENKIKAAFPGQTHVTFSSPNCLEMMDGGVSKGHALDAIAKMKGYALKDCIAFGDGMNDFEMLSMAGKGLVMGSAHHKVKS
ALPNHEIIGHCDEEAVAHYLVKHLLE

Sequences:

>Translated_266_residues
MYKIAASDLDGTLLTSEHQILPFTKQVLTQLHRQGTDFIFATGRHHIDVAHMRKQLGIPAFMITSNGARVHNCENEIIFK
RNIAPDVIKGMIEMFQSDPEIQVHLYRNDDWLISKEDPNNPCKQENFSYGLFDINNPPLENIAKIFIKHQDQNHEKLVIW
ENKIKAAFPGQTHVTFSSPNCLEMMDGGVSKGHALDAIAKMKGYALKDCIAFGDGMNDFEMLSMAGKGLVMGSAHHKVKS
ALPNHEIIGHCDEEAVAHYLVKHLLE
>Mature_266_residues
MYKIAASDLDGTLLTSEHQILPFTKQVLTQLHRQGTDFIFATGRHHIDVAHMRKQLGIPAFMITSNGARVHNCENEIIFK
RNIAPDVIKGMIEMFQSDPEIQVHLYRNDDWLISKEDPNNPCKQENFSYGLFDINNPPLENIAKIFIKHQDQNHEKLVIW
ENKIKAAFPGQTHVTFSSPNCLEMMDGGVSKGHALDAIAKMKGYALKDCIAFGDGMNDFEMLSMAGKGLVMGSAHHKVKS
ALPNHEIIGHCDEEAVAHYLVKHLLE

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=267, Percent_Identity=46.4419475655431, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI87081741, Length=266, Percent_Identity=34.9624060150376, Blast_Score=180, Evalue=9e-47,
Organism=Escherichia coli, GI1786982, Length=279, Percent_Identity=26.1648745519713, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87081790, Length=243, Percent_Identity=24.6913580246914, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29940; Mature: 29940

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKIAASDLDGTLLTSEHQILPFTKQVLTQLHRQGTDFIFATGRHHIDVAHMRKQLGIPA
CEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHCCCE
FMITSNGARVHNCENEIIFKRNIAPDVIKGMIEMFQSDPEIQVHLYRNDDWLISKEDPNN
EEEECCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCC
PCKQENFSYGLFDINNPPLENIAKIFIKHQDQNHEKLVIWENKIKAAFPGQTHVTFSSPN
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCEEEEECCCC
CLEMMDGGVSKGHALDAIAKMKGYALKDCIAFGDGMNDFEMLSMAGKGLVMGSAHHKVKS
HHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCEEECCHHHHHHH
ALPNHEIIGHCDEEAVAHYLVKHLLE
HCCCCCEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKIAASDLDGTLLTSEHQILPFTKQVLTQLHRQGTDFIFATGRHHIDVAHMRKQLGIPA
CEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHCCCE
FMITSNGARVHNCENEIIFKRNIAPDVIKGMIEMFQSDPEIQVHLYRNDDWLISKEDPNN
EEEECCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCC
PCKQENFSYGLFDINNPPLENIAKIFIKHQDQNHEKLVIWENKIKAAFPGQTHVTFSSPN
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCEEEEECCCC
CLEMMDGGVSKGHALDAIAKMKGYALKDCIAFGDGMNDFEMLSMAGKGLVMGSAHHKVKS
HHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCEEECCHHHHHHH
ALPNHEIIGHCDEEAVAHYLVKHLLE
HCCCCCEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]