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The map label for this gene is ssb [H]

Identifier: 119946996

GI number: 119946996

Start: 4190562

End: 4191230

Strand: Direct

Name: ssb [H]

Synonym: Ping_3391

Alternate gene names: 119946996

Gene position: 4190562-4191230 (Clockwise)

Preceding gene: 119946995

Following gene: 119946997

Centisome position: 91.91

GC content: 47.98

Gene sequence:

>669_bases
ATGTTTAACCGAAGCGTAAACAAAGTAGTCTTAGTCGGTAATCTGGGAAAAGATCCAGAAATGCGTTACATGCCAAACGG
CAATGCAGTAGCAAATTTAACACTGGCAACAACAGAAAGCTGGAAAGATAAACAAAGCGGCGAGCGCAAAGAAAAAACAG
AATGGCATCGCCTGACGGTATTTAACCGTCTGGGTGAAATGTGTGGAGAATATCTTAAAAAAGGTGTAAAGATTTACGTC
GAAGGTAAGTTACAGACGCGTAAATGGCAGGGACAAGACGGCCAGGACAAATATACAACCGAGATTGTGGTGTCAGAAAT
CCATATGATGGATGCGCGTAATCCAACCCAAGCCGGTAGTCAGCCTTTCCAGGGTAACGGACAGCAGGATAACGGACAGC
AAGAGCAACAAAGCTGGGGTAAAGCACCGCAACAAGCGCCGACTCAACAGCCTGCGCCGCAAATGGCCCCTGCCTACCAG
CAATCAACGCAAAATCAGCGTCCACCGGCACAAGCACCACAGCAACCAGCGCAAAATCAGCGTCCACCCGCGCAAACACA
ACAGCAACCAGCACAAAATCAGCGTCCACCAGCACAAGCACCACAGCAACCGACGCAGACTCAATATAATGAGCCATCAA
TGGATTTCGATGATGATATTCCTTTTTAG

Upstream 100 bases:

>100_bases
TTATATTAAAGTAAATAACCAAGTCTTTGCATTGAACAAAGCGCAAGAAATTTTAGCAAATACTTAATCTACAACATAAA
GCAGTAAGCGGAGCAAAAAG

Downstream 100 bases:

>100_bases
TTTTCAAACTTTTAAAATGTAAAATCAGAAAATTTTTTATTAGAGCCCCGTTTTTCGGGGCTTTTCTGTTTTTGTGAGGG
TAGATCGAAGTAGATAAATA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MFNRSVNKVVLVGNLGKDPEMRYMPNGNAVANLTLATTESWKDKQSGERKEKTEWHRLTVFNRLGEMCGEYLKKGVKIYV
EGKLQTRKWQGQDGQDKYTTEIVVSEIHMMDARNPTQAGSQPFQGNGQQDNGQQEQQSWGKAPQQAPTQQPAPQMAPAYQ
QSTQNQRPPAQAPQQPAQNQRPPAQTQQQPAQNQRPPAQAPQQPTQTQYNEPSMDFDDDIPF

Sequences:

>Translated_222_residues
MFNRSVNKVVLVGNLGKDPEMRYMPNGNAVANLTLATTESWKDKQSGERKEKTEWHRLTVFNRLGEMCGEYLKKGVKIYV
EGKLQTRKWQGQDGQDKYTTEIVVSEIHMMDARNPTQAGSQPFQGNGQQDNGQQEQQSWGKAPQQAPTQQPAPQMAPAYQ
QSTQNQRPPAQAPQQPAQNQRPPAQTQQQPAQNQRPPAQAPQQPTQTQYNEPSMDFDDDIPF
>Mature_222_residues
MFNRSVNKVVLVGNLGKDPEMRYMPNGNAVANLTLATTESWKDKQSGERKEKTEWHRLTVFNRLGEMCGEYLKKGVKIYV
EGKLQTRKWQGQDGQDKYTTEIVVSEIHMMDARNPTQAGSQPFQGNGQQDNGQQEQQSWGKAPQQAPTQQPAPQMAPAYQ
QSTQNQRPPAQAPQQPAQNQRPPAQTQQQPAQNQRPPAQAPQQPTQTQYNEPSMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=116, Percent_Identity=33.6206896551724, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI1790494, Length=122, Percent_Identity=59.8360655737705, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 25090; Mature: 25090

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRSVNKVVLVGNLGKDPEMRYMPNGNAVANLTLATTESWKDKQSGERKEKTEWHRLTV
CCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHH
FNRLGEMCGEYLKKGVKIYVEGKLQTRKWQGQDGQDKYTTEIVVSEIHMMDARNPTQAGS
HHHHHHHHHHHHHCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
QPFQGNGQQDNGQQEQQSWGKAPQQAPTQQPAPQMAPAYQQSTQNQRPPAQAPQQPAQNQ
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
RPPAQTQQQPAQNQRPPAQAPQQPTQTQYNEPSMDFDDDIPF
CCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFNRSVNKVVLVGNLGKDPEMRYMPNGNAVANLTLATTESWKDKQSGERKEKTEWHRLTV
CCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHH
FNRLGEMCGEYLKKGVKIYVEGKLQTRKWQGQDGQDKYTTEIVVSEIHMMDARNPTQAGS
HHHHHHHHHHHHHCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
QPFQGNGQQDNGQQEQQSWGKAPQQAPTQQPAPQMAPAYQQSTQNQRPPAQAPQQPAQNQ
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
RPPAQTQQQPAQNQRPPAQAPQQPTQTQYNEPSMDFDDDIPF
CCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9973335; 10952301 [H]