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The map label for this gene is yajR [H]

Identifier: 119946995

GI number: 119946995

Start: 4189161

End: 4190528

Strand: Direct

Name: yajR [H]

Synonym: Ping_3390

Alternate gene names: 119946995

Gene position: 4189161-4190528 (Clockwise)

Preceding gene: 119946993

Following gene: 119946996

Centisome position: 91.88

GC content: 42.25

Gene sequence:

>1368_bases
ATGCAATCTGATGCACTAAACCCTCTAGAAAGACGCACCGCCATCTCACTTTCCGTGGTGTTTGCGTTACGTATGTTAGG
CCTGTTTATGATCATGCCGGTCTTTGCCATTTACGGGAAGGAACTGATTGGTTATTCCCCGATCTGGGTAGGTTTTGCAA
TTGGTGCCTATGGTTTAACACAGGCATTATTACAAATTCCCGCGGGCATGTTGTCTGACAAATTTGGCCGACGTCCGATT
ATTTTTATCGGTTTACTGCTTTTTGCTATCGGCAGCTTAATCGCTGGCTATTCAGAAACGGTTTATGGTGTAACAGCCGG
ACGCGCTATTCAAGGTGCAGGTGCAATTGCCAGTGCGGTGTTAGCCTTGGCAGCCGATGTCACAAGAGAAGAACAACGTC
CCAAGGCAATGGCCATGATTGGGGTCAGTATTGGCCTTGCCTTTGCATTGGCAATGGTTGCAGGTCCTGTTTTAGCACCC
ATAATTGGCTTACAGGGTTTATTCTTTATTACTGCAGCCGGTGCCCTGACCGGTATTGCTATCGTCTATTTTGTCGTGCC
GCACGTGGTTAGTAAAGCCCCCAGAGGCGAAACCGTTGCCATTCCTGCATTGCTTGCAAAATTAGTCAAAGATCCGCAAC
TGCTACGTTTAGATGCTGGCATTTTCATTTTACACATGGCACTCACGGCTATGTTTGTCGTATTACCCCTGCAACTGCTG
AATATGCAATTACCTGCAGCACAACATTGGCACTTATACCTGCCGGCGTTACTAGTTTCATTTATATTAATAGTGCCTAT
GCTTATCATGGCTGCCCGCAAGCAAATGAACAAACAGTTTTATCTGTTTGCCATTTTGTTAATGGCTGCAAGTTTAATTG
CAATGTCACTTAACTCTCAATCACTTATATGGATGTTTGTGTCCATATTATTTTATTTCACTGCTTTTAATTTTTTAGAA
GCATCATTACCGGCATTTATCTCAATGGTCTCTCCTGCAGGCTCCAAGGGTAGTGCAATGGGGATCTATAGCACTTGTCA
GTTTTTAGGTGCTTTTTTTGGTGGGATTTTAGGGGGATTTTCCTATAAACTACTCGGTAGTAGTGGCTTATTTTTATTTT
TAGCCGGGTTAATGGCAATTTGGTTTTTTATCTCATTAGGTATGAATAATCCAAGTAAAGTCCGCACCCATACTATTACA
GCATTAATCAAGGATGAAACTCATGCACAGTTAATGACTGAACAGCTAATTATGCTGGAGGGGGTCTTAGAAGTCGTCAT
CATCGTTGAAGAACAAACAGTTTATATTAAAGTAAATAACCAAGTCTTTGCATTGAACAAAGCGCAAGAAATTTTAGCAA
ATACTTAA

Upstream 100 bases:

>100_bases
TGTCTGCAAATGCGCTAAAAATAAAAGCTTATGTCGCTGCTATCATGTTATTATTGCCGCCCGATTTATTTCTGCCTATC
GCCTTAAAAATGGATGTTCA

Downstream 100 bases:

>100_bases
TCTACAACATAAAGCAGTAAGCGGAGCAAAAAGATGTTTAACCGAAGCGTAAACAAAGTAGTCTTAGTCGGTAATCTGGG
AAAAGATCCAGAAATGCGTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MQSDALNPLERRTAISLSVVFALRMLGLFMIMPVFAIYGKELIGYSPIWVGFAIGAYGLTQALLQIPAGMLSDKFGRRPI
IFIGLLLFAIGSLIAGYSETVYGVTAGRAIQGAGAIASAVLALAADVTREEQRPKAMAMIGVSIGLAFALAMVAGPVLAP
IIGLQGLFFITAAGALTGIAIVYFVVPHVVSKAPRGETVAIPALLAKLVKDPQLLRLDAGIFILHMALTAMFVVLPLQLL
NMQLPAAQHWHLYLPALLVSFILIVPMLIMAARKQMNKQFYLFAILLMAASLIAMSLNSQSLIWMFVSILFYFTAFNFLE
ASLPAFISMVSPAGSKGSAMGIYSTCQFLGAFFGGILGGFSYKLLGSSGLFLFLAGLMAIWFFISLGMNNPSKVRTHTIT
ALIKDETHAQLMTEQLIMLEGVLEVVIIVEEQTVYIKVNNQVFALNKAQEILANT

Sequences:

>Translated_455_residues
MQSDALNPLERRTAISLSVVFALRMLGLFMIMPVFAIYGKELIGYSPIWVGFAIGAYGLTQALLQIPAGMLSDKFGRRPI
IFIGLLLFAIGSLIAGYSETVYGVTAGRAIQGAGAIASAVLALAADVTREEQRPKAMAMIGVSIGLAFALAMVAGPVLAP
IIGLQGLFFITAAGALTGIAIVYFVVPHVVSKAPRGETVAIPALLAKLVKDPQLLRLDAGIFILHMALTAMFVVLPLQLL
NMQLPAAQHWHLYLPALLVSFILIVPMLIMAARKQMNKQFYLFAILLMAASLIAMSLNSQSLIWMFVSILFYFTAFNFLE
ASLPAFISMVSPAGSKGSAMGIYSTCQFLGAFFGGILGGFSYKLLGSSGLFLFLAGLMAIWFFISLGMNNPSKVRTHTIT
ALIKDETHAQLMTEQLIMLEGVLEVVIIVEEQTVYIKVNNQVFALNKAQEILANT
>Mature_455_residues
MQSDALNPLERRTAISLSVVFALRMLGLFMIMPVFAIYGKELIGYSPIWVGFAIGAYGLTQALLQIPAGMLSDKFGRRPI
IFIGLLLFAIGSLIAGYSETVYGVTAGRAIQGAGAIASAVLALAADVTREEQRPKAMAMIGVSIGLAFALAMVAGPVLAP
IIGLQGLFFITAAGALTGIAIVYFVVPHVVSKAPRGETVAIPALLAKLVKDPQLLRLDAGIFILHMALTAMFVVLPLQLL
NMQLPAAQHWHLYLPALLVSFILIVPMLIMAARKQMNKQFYLFAILLMAASLIAMSLNSQSLIWMFVSILFYFTAFNFLE
ASLPAFISMVSPAGSKGSAMGIYSTCQFLGAFFGGILGGFSYKLLGSSGLFLFLAGLMAIWFFISLGMNNPSKVRTHTIT
ALIKDETHAQLMTEQLIMLEGVLEVVIIVEEQTVYIKVNNQVFALNKAQEILANT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=446, Percent_Identity=43.4977578475336, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49025; Mature: 49025

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSDALNPLERRTAISLSVVFALRMLGLFMIMPVFAIYGKELIGYSPIWVGFAIGAYGLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QALLQIPAGMLSDKFGRRPIIFIGLLLFAIGSLIAGYSETVYGVTAGRAIQGAGAIASAV
HHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHCCHHHHHHHH
LALAADVTREEQRPKAMAMIGVSIGLAFALAMVAGPVLAPIIGLQGLFFITAAGALTGIA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVYFVVPHVVSKAPRGETVAIPALLAKLVKDPQLLRLDAGIFILHMALTAMFVVLPLQLL
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
NMQLPAAQHWHLYLPALLVSFILIVPMLIMAARKQMNKQFYLFAILLMAASLIAMSLNSQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
SLIWMFVSILFYFTAFNFLEASLPAFISMVSPAGSKGSAMGIYSTCQFLGAFFGGILGGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SYKLLGSSGLFLFLAGLMAIWFFISLGMNNPSKVRTHTITALIKDETHAQLMTEQLIMLE
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVLEVVIIVEEQTVYIKVNNQVFALNKAQEILANT
HHHHHEEEEECCEEEEEECCEEEEECHHHHHHCCC
>Mature Secondary Structure
MQSDALNPLERRTAISLSVVFALRMLGLFMIMPVFAIYGKELIGYSPIWVGFAIGAYGLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QALLQIPAGMLSDKFGRRPIIFIGLLLFAIGSLIAGYSETVYGVTAGRAIQGAGAIASAV
HHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHCCHHHHHHHH
LALAADVTREEQRPKAMAMIGVSIGLAFALAMVAGPVLAPIIGLQGLFFITAAGALTGIA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVYFVVPHVVSKAPRGETVAIPALLAKLVKDPQLLRLDAGIFILHMALTAMFVVLPLQLL
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
NMQLPAAQHWHLYLPALLVSFILIVPMLIMAARKQMNKQFYLFAILLMAASLIAMSLNSQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
SLIWMFVSILFYFTAFNFLEASLPAFISMVSPAGSKGSAMGIYSTCQFLGAFFGGILGGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SYKLLGSSGLFLFLAGLMAIWFFISLGMNNPSKVRTHTITALIKDETHAQLMTEQLIMLE
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVLEVVIIVEEQTVYIKVNNQVFALNKAQEILANT
HHHHHEEEEECCEEEEEECCEEEEECHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]