| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is gntX [H]
Identifier: 119946807
GI number: 119946807
Start: 3954862
End: 3955542
Strand: Direct
Name: gntX [H]
Synonym: Ping_3201
Alternate gene names: 119946807
Gene position: 3954862-3955542 (Clockwise)
Preceding gene: 119946805
Following gene: 119946808
Centisome position: 86.74
GC content: 39.94
Gene sequence:
>681_bases ATGTGCGAATTGTCAAGCCATGACAAGCTGATCTGTCAATATTGCCAAACAGCATTACTCGAAGCGAGAACCTGCTGTTT ACGCTGCGGCTTAGCGTTGAATATCTCTTTACCCTTTTGCGGAGATTGTTTGAAAAAAGCACACTTATTTGAACAATTAC ATGCCCTTGGAAGTTATCAACCGCCCTATTCACAGATGGTTAAAAAATTAAAATATACAAAACAGTTGCTTTACGGAGAG CTATTGGGCGAATTACTCACGGAATCGATTCTGCTTAATTTATCCGCGCAGCAGATAAGTACAGTTGATTACTTATTACC CGTGCCATTACACACAAAAAAACAGCGTTCCCGTGGTTTTAATCAAGCAACTATCATAGCGCAGGTGATCGCAAAACGAT TAAATACTCCCCTTTTATTAGAAGGGGTCGAGCGCCATATAAGCACAATGCCGCAGGAAGGGCTTACATTATATAACAGA AAGAAAAATTTAAATGGCGCTTTTTCTATCTGCCCATCAATGCAGCAAGAGATAATAGGTGCTTATATTGTCATTATCGA TGATGTTGTCACCACTGGCGCAACAGTAAATAGTTTGTGTCACACACTATTAGAAGCAGGGGCACAACGAATCGATATTT GGTGCATCAGCAGAACATCATTGAACACTCAAAAATCATAA
Upstream 100 bases:
>100_bases CTCTCTTTTAATTGGATAAACGCTGGTGCAAACAGTTACTGCCTTTATTAAACAAAAATGCAAAAAATTAATCGCACAAT GCTTACCTGCCCGGTGTTTA
Downstream 100 bases:
>100_bases CACATATGCTTATTTCCGAATCATTTATTGGGTGGCAATGAATGCTAGACAGACATAAAACGCTATTTTAGTCTTTGCTC TTGATTTGATTCATGACTCG
Product: amidophosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQPPYSQMVKKLKYTKQLLYGE LLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGFNQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNR KKNLNGAFSICPSMQQEIIGAYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS
Sequences:
>Translated_226_residues MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQPPYSQMVKKLKYTKQLLYGE LLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGFNQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNR KKNLNGAFSICPSMQQEIIGAYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS >Mature_226_residues MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQPPYSQMVKKLKYTKQLLYGE LLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGFNQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNR KKNLNGAFSICPSMQQEIIGAYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=212, Percent_Identity=33.0188679245283, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 25198; Mature: 25198
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC PPYSQMVKKLKYTKQLLYGELLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCC NQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNRKKNLNGAFSICPSMQQEIIG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCHHHHHHHHH AYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC PPYSQMVKKLKYTKQLLYGELLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCC NQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNRKKNLNGAFSICPSMQQEIIG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCHHHHHHHHH AYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]