Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is gntX [H]

Identifier: 119946807

GI number: 119946807

Start: 3954862

End: 3955542

Strand: Direct

Name: gntX [H]

Synonym: Ping_3201

Alternate gene names: 119946807

Gene position: 3954862-3955542 (Clockwise)

Preceding gene: 119946805

Following gene: 119946808

Centisome position: 86.74

GC content: 39.94

Gene sequence:

>681_bases
ATGTGCGAATTGTCAAGCCATGACAAGCTGATCTGTCAATATTGCCAAACAGCATTACTCGAAGCGAGAACCTGCTGTTT
ACGCTGCGGCTTAGCGTTGAATATCTCTTTACCCTTTTGCGGAGATTGTTTGAAAAAAGCACACTTATTTGAACAATTAC
ATGCCCTTGGAAGTTATCAACCGCCCTATTCACAGATGGTTAAAAAATTAAAATATACAAAACAGTTGCTTTACGGAGAG
CTATTGGGCGAATTACTCACGGAATCGATTCTGCTTAATTTATCCGCGCAGCAGATAAGTACAGTTGATTACTTATTACC
CGTGCCATTACACACAAAAAAACAGCGTTCCCGTGGTTTTAATCAAGCAACTATCATAGCGCAGGTGATCGCAAAACGAT
TAAATACTCCCCTTTTATTAGAAGGGGTCGAGCGCCATATAAGCACAATGCCGCAGGAAGGGCTTACATTATATAACAGA
AAGAAAAATTTAAATGGCGCTTTTTCTATCTGCCCATCAATGCAGCAAGAGATAATAGGTGCTTATATTGTCATTATCGA
TGATGTTGTCACCACTGGCGCAACAGTAAATAGTTTGTGTCACACACTATTAGAAGCAGGGGCACAACGAATCGATATTT
GGTGCATCAGCAGAACATCATTGAACACTCAAAAATCATAA

Upstream 100 bases:

>100_bases
CTCTCTTTTAATTGGATAAACGCTGGTGCAAACAGTTACTGCCTTTATTAAACAAAAATGCAAAAAATTAATCGCACAAT
GCTTACCTGCCCGGTGTTTA

Downstream 100 bases:

>100_bases
CACATATGCTTATTTCCGAATCATTTATTGGGTGGCAATGAATGCTAGACAGACATAAAACGCTATTTTAGTCTTTGCTC
TTGATTTGATTCATGACTCG

Product: amidophosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQPPYSQMVKKLKYTKQLLYGE
LLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGFNQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNR
KKNLNGAFSICPSMQQEIIGAYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS

Sequences:

>Translated_226_residues
MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQPPYSQMVKKLKYTKQLLYGE
LLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGFNQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNR
KKNLNGAFSICPSMQQEIIGAYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS
>Mature_226_residues
MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQPPYSQMVKKLKYTKQLLYGE
LLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGFNQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNR
KKNLNGAFSICPSMQQEIIGAYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS

Specific function: Could be involved in gluconate metabolism [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=212, Percent_Identity=33.0188679245283, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 25198; Mature: 25198

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
PPYSQMVKKLKYTKQLLYGELLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCC
NQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNRKKNLNGAFSICPSMQQEIIG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCHHHHHHHHH
AYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MCELSSHDKLICQYCQTALLEARTCCLRCGLALNISLPFCGDCLKKAHLFEQLHALGSYQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
PPYSQMVKKLKYTKQLLYGELLGELLTESILLNLSAQQISTVDYLLPVPLHTKKQRSRGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCC
NQATIIAQVIAKRLNTPLLLEGVERHISTMPQEGLTLYNRKKNLNGAFSICPSMQQEIIG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHCHHHHHHHHH
AYIVIIDDVVTTGATVNSLCHTLLEAGAQRIDIWCISRTSLNTQKS
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]