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The map label for this gene is xerC [H]

Identifier: 119946567

GI number: 119946567

Start: 3631566

End: 3632138

Strand: Direct

Name: xerC [H]

Synonym: Ping_2946

Alternate gene names: 119946567

Gene position: 3631566-3632138 (Clockwise)

Preceding gene: 119946558

Following gene: 119946572

Centisome position: 79.65

GC content: 45.38

Gene sequence:

>573_bases
ATGGCACAAGCAAAGACACTTAGCAAATCAGAACTTAAGCAGCTGTTAGACGTAACAAATTCGTGCAGTCGATATTCGGC
ACGTGATAGCACTATGCTGCTGTTTACGCACTTGTGTGGTTTACGTGTTGGCGAAGTAGCTGCGCTGCGTTTTGACGACA
TACTTGATGCAAACGGCACAGTACGAGACGAAATGACACTTGATGCTGCGCGAACAAAGAGCAAACGAGCACGTAAGATA
TTCTTACCAAAGCAGATGCAGCGTCAGCTACAAGCATACGTTAACAGCTTAAACAAACAGCCACAGCACGGTTATTTGTT
CTCTACACAGAAGCAAGCACACTTTAGTGCAAATACAGCTACACAGCATCTACAACGCTTGTATGCACGTGCTGGGATTA
GTGGTGCTACATCACACAGTGGTAGACGCACTTGGCTTACAGCACTTAGTCAGAGAGGTGTTAGCGTGTTTGTACTAGCG
GATATGGCTGGACACAGAAGCATTCAAACAACGCAGCGTTACGTTACAGTTAATGATGAGATGAAACGTAACGCAGCAGA
GTTGATTAGCTAA

Upstream 100 bases:

>100_bases
TTGAGTTATCGAAGGTATTTATAAGGCACATTCTGGTTGCTCAAAACAAACGTCAGAAAATACACTGTATGTACGAAAAC
ATTACATTTAGGTGGTTTAT

Downstream 100 bases:

>100_bases
CAGAGAAGTCAAAGAATATCTGTGTGGATACTTTGTCATCTTTACTGTTTGGCACCAATCTATTGCCTTCAGAACGGCAA
TTGTATTGCTCCTCTAACAT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MAQAKTLSKSELKQLLDVTNSCSRYSARDSTMLLFTHLCGLRVGEVAALRFDDILDANGTVRDEMTLDAARTKSKRARKI
FLPKQMQRQLQAYVNSLNKQPQHGYLFSTQKQAHFSANTATQHLQRLYARAGISGATSHSGRRTWLTALSQRGVSVFVLA
DMAGHRSIQTTQRYVTVNDEMKRNAAELIS

Sequences:

>Translated_190_residues
MAQAKTLSKSELKQLLDVTNSCSRYSARDSTMLLFTHLCGLRVGEVAALRFDDILDANGTVRDEMTLDAARTKSKRARKI
FLPKQMQRQLQAYVNSLNKQPQHGYLFSTQKQAHFSANTATQHLQRLYARAGISGATSHSGRRTWLTALSQRGVSVFVLA
DMAGHRSIQTTQRYVTVNDEMKRNAAELIS
>Mature_189_residues
AQAKTLSKSELKQLLDVTNSCSRYSARDSTMLLFTHLCGLRVGEVAALRFDDILDANGTVRDEMTLDAARTKSKRARKIF
LPKQMQRQLQAYVNSLNKQPQHGYLFSTQKQAHFSANTATQHLQRLYARAGISGATSHSGRRTWLTALSQRGVSVFVLAD
MAGHRSIQTTQRYVTVNDEMKRNAAELIS

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 21291; Mature: 21159

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAKTLSKSELKQLLDVTNSCSRYSARDSTMLLFTHLCGLRVGEVAALRFDDILDANGT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
VRDEMTLDAARTKSKRARKIFLPKQMQRQLQAYVNSLNKQPQHGYLFSTQKQAHFSANTA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCHHHH
TQHLQRLYARAGISGATSHSGRRTWLTALSQRGVSVFVLADMAGHRSIQTTQRYVTVNDE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHEEEECHH
MKRNAAELIS
HHHHHHHHCC
>Mature Secondary Structure 
AQAKTLSKSELKQLLDVTNSCSRYSARDSTMLLFTHLCGLRVGEVAALRFDDILDANGT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
VRDEMTLDAARTKSKRARKIFLPKQMQRQLQAYVNSLNKQPQHGYLFSTQKQAHFSANTA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCHHHH
TQHLQRLYARAGISGATSHSGRRTWLTALSQRGVSVFVLADMAGHRSIQTTQRYVTVNDE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHEEEECHH
MKRNAAELIS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA