Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946490

Identifier: 119946490

GI number: 119946490

Start: 3546648

End: 3547271

Strand: Direct

Name: 119946490

Synonym: Ping_2866

Alternate gene names: NA

Gene position: 3546648-3547271 (Clockwise)

Preceding gene: 119946489

Following gene: 119946491

Centisome position: 77.78

GC content: 37.02

Gene sequence:

>624_bases
ATGGAATTGGATTGGGTAGAATGGTTTGGTTATTTAGCGTCGCTGGTGGTGCTGATTTCTCTCACTATGTCTTCAATTAT
CAAACTAAGAGTGATTAACTTTATCGGTTGTCTGCTCTTTGCAAGCTTTGCCTATTTTATTGATTCAGTACCAACGATCT
TTATGAATCTCAGCATTGCCTGTATTAACCTTTATTTCCTGTATCAAATTTATCGCACCAAAGAAGAATTTAAAATAATT
TCAGCGTCGAAAAATTCTGAATATTTTCAGCATTTTATTAATATTAATCGCCAGGATATTGAAAAGCAGATAAATCTGGA
GCAGTTAAGATCAGCTGACACATTATTTTATATGTTGCGCGATAATAATATAGCCGGCGTGCTTGCAGGCACAAAAGAAG
CTGACGGTACTTTTGCCATTATGCTTGATTACGTCATCCCTAGATATCGTGACTTTAAGCTGGGTAGCTATTATTATCAA
ACTCACCCAGAATTTCTGAAAGAGAAAGGGATCACGGCGCTGAAGACAACCGCAAGCGATCAGGATCATTGTTTATATCT
TAATAAAATGGGCTTTGCTGCACAGCCGGACAATCAATCACAAACCTATATAAAAAGGCTCTAA

Upstream 100 bases:

>100_bases
GGACATCTCTTAAACTATAAAAGCGTTGAGGTTAGAGAGTTAAATCAACACAGCTCAAGCGAAACATTCGCTTGAGCTGA
AAAATAACAGAGGAATGAGT

Downstream 100 bases:

>100_bases
CATTATGCAAAAAAACTATTTTACTGAACTTAAAAAACTACTTGATAATGCTCAAGCGCCCTACTCAGGATTTAATGTTG
CAGCCATTGTAATAACCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIACINLYFLYQIYRTKEEFKII
SASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLRDNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQ
THPEFLKEKGITALKTTASDQDHCLYLNKMGFAAQPDNQSQTYIKRL

Sequences:

>Translated_207_residues
MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIACINLYFLYQIYRTKEEFKII
SASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLRDNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQ
THPEFLKEKGITALKTTASDQDHCLYLNKMGFAAQPDNQSQTYIKRL
>Mature_207_residues
MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIACINLYFLYQIYRTKEEFKII
SASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLRDNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQ
THPEFLKEKGITALKTTASDQDHCLYLNKMGFAAQPDNQSQTYIKRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24116; Mature: 24116

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CINLYFLYQIYRTKEEFKIISASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLR
HHHHHHHHHHHHCHHHHEEEECCCCHHHHHHHHCCCHHHHHHHCCHHHHHCCCCEEEEEE
DNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQTHPEFLKEKGITALKTTASD
CCCEEEEEECCCCCCCHHEEHHHHHCCCCCCCCCCCCHHHCCHHHHHHCCCEEEEECCCC
QDHCLYLNKMGFAAQPDNQSQTYIKRL
CCCEEEEECCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MELDWVEWFGYLASLVVLISLTMSSIIKLRVINFIGCLLFASFAYFIDSVPTIFMNLSIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CINLYFLYQIYRTKEEFKIISASKNSEYFQHFININRQDIEKQINLEQLRSADTLFYMLR
HHHHHHHHHHHHCHHHHEEEECCCCHHHHHHHHCCCHHHHHHHCCHHHHHCCCCEEEEEE
DNNIAGVLAGTKEADGTFAIMLDYVIPRYRDFKLGSYYYQTHPEFLKEKGITALKTTASD
CCCEEEEEECCCCCCCHHEEHHHHHCCCCCCCCCCCCHHHCCHHHHHHCCCEEEEECCCC
QDHCLYLNKMGFAAQPDNQSQTYIKRL
CCCEEEEECCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA