| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946476
Identifier: 119946476
GI number: 119946476
Start: 3528932
End: 3529555
Strand: Reverse
Name: 119946476
Synonym: Ping_2851
Alternate gene names: NA
Gene position: 3529555-3528932 (Counterclockwise)
Preceding gene: 119946477
Following gene: 119946475
Centisome position: 77.41
GC content: 36.38
Gene sequence:
>624_bases ATGAAACTTCAAGGTAAGGTAACAAATTGGAATGACGATAAAGGTTTTGGTTTTGTCGATCCAAATGGTGGTGGTAATAG GGCATTTATTCATATAAAAGCCTTCACATCGGGTTCTCTAAGGCCTGTTAACGGCGACATTATTATTTATGAGTTAGTTC GAGATCAGAATAATCGCTATCAAGCGGATAAAATTAAATTTGCTGGTGATAATAAAAATGCTAATAAAACGCGACAGTCT AAAAGCGGTCATTTCTTTGGCACTTTTTTAACCATGATTTTTTGTGTCGCGCTGGCAGGTGCTGTTTTTACCGGAAAGTT GATTTCTGTCGTTGCGGGTATCTATCTATTGATGAGTTTTGTCGCTTTTATTGCCTATGCAATAGACAAATCGGCAGCAC AAAAGGGACGATGGAGAACAAAAGAGAGTACCTTACATTTATACTCTCTTCTTGGCGGTTGGCCTGGTGCCTTTTTTGCG CAAAAAATCTTGGGCCACAAATTAAAGAAAGATAAATTTAAAACCCTTTATTGGGTGACCGTAATGGTCAATATATCGGT TTTATTCTGTTTCCTAAGCGCAAAAAATGCTGATTTTATTAATTCTATTATTCAAAATAGTTAA
Upstream 100 bases:
>100_bases AATGTGTTTGTTGATGGCGAGCAGAATATAATTACAGAAATGCGCTGGTCCTGTTCTGTGTGGGGTCAACTTCGTCACTA TCCCATTCCTGAGAGAGTAG
Downstream 100 bases:
>100_bases AAAATTAACAAGTTAACCGATAAAAACGTCCTGAAAAACAACGCTAATAAACATTTATTAAACTTTTTTTACTTTTTGTT CCGCTTTTTTTTATACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKLQGKVTNWNDDKGFGFVDPNGGGNRAFIHIKAFTSGSLRPVNGDIIIYELVRDQNNRYQADKIKFAGDNKNANKTRQS KSGHFFGTFLTMIFCVALAGAVFTGKLISVVAGIYLLMSFVAFIAYAIDKSAAQKGRWRTKESTLHLYSLLGGWPGAFFA QKILGHKLKKDKFKTLYWVTVMVNISVLFCFLSAKNADFINSIIQNS
Sequences:
>Translated_207_residues MKLQGKVTNWNDDKGFGFVDPNGGGNRAFIHIKAFTSGSLRPVNGDIIIYELVRDQNNRYQADKIKFAGDNKNANKTRQS KSGHFFGTFLTMIFCVALAGAVFTGKLISVVAGIYLLMSFVAFIAYAIDKSAAQKGRWRTKESTLHLYSLLGGWPGAFFA QKILGHKLKKDKFKTLYWVTVMVNISVLFCFLSAKNADFINSIIQNS >Mature_207_residues MKLQGKVTNWNDDKGFGFVDPNGGGNRAFIHIKAFTSGSLRPVNGDIIIYELVRDQNNRYQADKIKFAGDNKNANKTRQS KSGHFFGTFLTMIFCVALAGAVFTGKLISVVAGIYLLMSFVAFIAYAIDKSAAQKGRWRTKESTLHLYSLLGGWPGAFFA QKILGHKLKKDKFKTLYWVTVMVNISVLFCFLSAKNADFINSIIQNS
Specific function: Unknown
COG id: COG3326
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23052; Mature: 23052
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQGKVTNWNDDKGFGFVDPNGGGNRAFIHIKAFTSGSLRPVNGDIIIYELVRDQNNRY CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCEECCCCEEEEEEECCCCCCE QADKIKFAGDNKNANKTRQSKSGHFFGTFLTMIFCVALAGAVFTGKLISVVAGIYLLMSF ECCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFIAYAIDKSAAQKGRWRTKESTLHLYSLLGGWPGAFFAQKILGHKLKKDKFKTLYWVT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VMVNISVLFCFLSAKNADFINSIIQNS HHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MKLQGKVTNWNDDKGFGFVDPNGGGNRAFIHIKAFTSGSLRPVNGDIIIYELVRDQNNRY CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCEECCCCEEEEEEECCCCCCE QADKIKFAGDNKNANKTRQSKSGHFFGTFLTMIFCVALAGAVFTGKLISVVAGIYLLMSF ECCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFIAYAIDKSAAQKGRWRTKESTLHLYSLLGGWPGAFFAQKILGHKLKKDKFKTLYWVT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VMVNISVLFCFLSAKNADFINSIIQNS HHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA