| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946475
Identifier: 119946475
GI number: 119946475
Start: 3527673
End: 3528449
Strand: Reverse
Name: 119946475
Synonym: Ping_2850
Alternate gene names: NA
Gene position: 3528449-3527673 (Counterclockwise)
Preceding gene: 119946476
Following gene: 119946474
Centisome position: 77.39
GC content: 46.07
Gene sequence:
>777_bases ATGAACACACTTAAAAATTATTCAAAAAAAATATCACAATCTTTACTTATTAGCGGGTTGTTAGTGGGTAATGCCGTCGC CGGTTATCCGGAGTCTCCTGTCCAGCTTAACAGTGCGGACAATTTTGCCGTATTAAGTAAATCGGGTATTACCAATGTTT CTGACTCGATAGTTACAGGGGATGTTGGTGCAAGCCCTATCACAGGTGCTGCGACACTGCTTACCTGTAGCGAAGTGGTT GGTGATATATACGCCACCGATGCAAATGGTCCTGCACCCTGCTCAATCAATGCCCCCGGCACTCTAGGTTCTGCTATTGG TGATATGGGAATTGCATACAATGACGCTGCAGGGCGAGTTTCACCGGATGAGACCGAATTGGGTGCGGGTGAAATTGGCG GATTAACGCTGACTCCTGGTCTTTATAAATGGTCTACGGATGTGGGTATTACGAGCGATGTGACGCTTAAAGGCAACGCT ACGGATGTGTGGATCTTACAGATTGCAGGTACACTAAGCCAAGCGGCTTATAAGAATGTAACATTGGCTGGTGGCGCATT AGCTGAGAATGTTTTCTGGCAGGTTGCCGATTCGGTTACGATTGGAACAGGTGCCCATTTTGAAGGTATTATTCTGGGTC AAAAACTGATCGCAGTAAATACCGGTGCCACTGTTAAGGGCAGATTGTTTGCACAGACAGCGGTTACTCTGCAGAAGAAC AAAATTACTGAGGCGCCTGTTAGTCATGAGCCGTCTGTTAATAATGAATCTGAGTAA
Upstream 100 bases:
>100_bases ATCTGAGACCCAAGTGGATTGGAGGCGCAATTTTTGGCAATAACATAATATTTGTCATTATTATTTTACAGATTTAAAAT TTCTCATGGAGGAAAAATTG
Downstream 100 bases:
>100_bases TCAGGAAAACTGCTTGGCTTAATTTAATATTTGGCCACAGCGATTCGTTTAAAAGGATCACAGATTTAGTTCTGTGATCC TTTTTTTTTTGAGCTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNTLKNYSKKISQSLLISGLLVGNAVAGYPESPVQLNSADNFAVLSKSGITNVSDSIVTGDVGASPITGAATLLTCSEVV GDIYATDANGPAPCSINAPGTLGSAIGDMGIAYNDAAGRVSPDETELGAGEIGGLTLTPGLYKWSTDVGITSDVTLKGNA TDVWILQIAGTLSQAAYKNVTLAGGALAENVFWQVADSVTIGTGAHFEGIILGQKLIAVNTGATVKGRLFAQTAVTLQKN KITEAPVSHEPSVNNESE
Sequences:
>Translated_258_residues MNTLKNYSKKISQSLLISGLLVGNAVAGYPESPVQLNSADNFAVLSKSGITNVSDSIVTGDVGASPITGAATLLTCSEVV GDIYATDANGPAPCSINAPGTLGSAIGDMGIAYNDAAGRVSPDETELGAGEIGGLTLTPGLYKWSTDVGITSDVTLKGNA TDVWILQIAGTLSQAAYKNVTLAGGALAENVFWQVADSVTIGTGAHFEGIILGQKLIAVNTGATVKGRLFAQTAVTLQKN KITEAPVSHEPSVNNESE >Mature_258_residues MNTLKNYSKKISQSLLISGLLVGNAVAGYPESPVQLNSADNFAVLSKSGITNVSDSIVTGDVGASPITGAATLLTCSEVV GDIYATDANGPAPCSINAPGTLGSAIGDMGIAYNDAAGRVSPDETELGAGEIGGLTLTPGLYKWSTDVGITSDVTLKGNA TDVWILQIAGTLSQAAYKNVTLAGGALAENVFWQVADSVTIGTGAHFEGIILGQKLIAVNTGATVKGRLFAQTAVTLQKN KITEAPVSHEPSVNNESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26240; Mature: 26240
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLKNYSKKISQSLLISGLLVGNAVAGYPESPVQLNSADNFAVLSKSGITNVSDSIVTG CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEC DVGASPITGAATLLTCSEVVGDIYATDANGPAPCSINAPGTLGSAIGDMGIAYNDAAGRV CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEECCCCCCHHHHHHCCCEEECCCCCCC SPDETELGAGEIGGLTLTPGLYKWSTDVGITSDVTLKGNATDVWILQIAGTLSQAAYKNV CCCCCCCCCCCCCCEEECCCCEEEECCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHCCE TLAGGALAENVFWQVADSVTIGTGAHFEGIILGQKLIAVNTGATVKGRLFAQTAVTLQKN EEECCHHHHHHHHHHHCCEEECCCCCEEEEEECCEEEEEECCCCEECEEEEEEEEEEECC KITEAPVSHEPSVNNESE CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTLKNYSKKISQSLLISGLLVGNAVAGYPESPVQLNSADNFAVLSKSGITNVSDSIVTG CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEC DVGASPITGAATLLTCSEVVGDIYATDANGPAPCSINAPGTLGSAIGDMGIAYNDAAGRV CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEECCCCCCHHHHHHCCCEEECCCCCCC SPDETELGAGEIGGLTLTPGLYKWSTDVGITSDVTLKGNATDVWILQIAGTLSQAAYKNV CCCCCCCCCCCCCCEEECCCCEEEECCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHCCE TLAGGALAENVFWQVADSVTIGTGAHFEGIILGQKLIAVNTGATVKGRLFAQTAVTLQKN EEECCHHHHHHHHHHHCCEEECCCCCEEEEEECCEEEEEECCCCEECEEEEEEEEEEECC KITEAPVSHEPSVNNESE CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA