| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946377
Identifier: 119946377
GI number: 119946377
Start: 3375028
End: 3375939
Strand: Direct
Name: 119946377
Synonym: Ping_2751
Alternate gene names: NA
Gene position: 3375028-3375939 (Clockwise)
Preceding gene: 119946375
Following gene: 119946381
Centisome position: 74.02
GC content: 44.74
Gene sequence:
>912_bases ATGGCAATAAAAAATACCGAGCTAATCAACGAAAATCGAATTGACCGCAGCCTGCGTGCTTTTGTGGGGCTTGCCTGCCT GCAAATTGCTTACTTTTGGCTCAGTGGATGGTGGATGACCCTTTTTTATCTGTTAAGCGCAGTTCTGTTTTTGACTGCCG CTGTTGGATTTTGCCCTCTTTACCGGGTGCTAGGTCTGCGCAGTAACAACAAACAGAGTACCGCCGGTAAAGTGTGGCTG ACGATCGCCGCACTGGTTTTTATTACACAACTTGTGCTTGGCAGTTACGCCAGTCATTTCTTTTCCAAGAAATTTTACCT TGAAGACTTTAATGTTATGAATAACAACTACAAACAGGCGCTATTTTTTACCGGACAGGAAAACAGGGCAAAGGCGATAG ACAATTACGACCAACTTCGAATCAATTACGCGCGTTTTAAGAATAAATATCTGGCCTATCATCCCTACGCTCTTAAAGGT GATGGTCAGTTTAATGACGATCTAATCCGAATTGAAGAGATACTGACCGAAACAGCAGACAATGTTCGAAGCGGTGATCT GCATCAGGCACACTTGATGCTCGAAAAAGTCCGCCCTGTTTTTCAGAATATTTTTAAACGTAACAACTTCTCGATGCTGG CGGTCACACTGATTGATTTTCACGATACCATGGAGTTAATGCTCACAGCTGCAACGCTCAAGGATGCAACTCAAGTAAAG GCCCTTTACCCACAAGTAGACAAAAAACTGCAGGCCATAGAAGTTGAAGCCAACGATGCCGACATTCAGGCTATCCGCGA CAATCTGGAGACATTATTCAAGCTCGCCAAAAGTGGCGCGGTTGAACAGCTGACAGCACAGGGTAAAAAGCTCAAAAGCA GTTTTGTGAAGGTCTATTTGCAGCGCGGCTAG
Upstream 100 bases:
>100_bases TTTTGCACTGGTACTGCGCACAATTTTGTATCTACGGCATAGATTATCCACTTTTTTTTTATATACTCTAATAGTAAAAG ATTCAATTGGAGAATAAATA
Downstream 100 bases:
>100_bases AGAGGAATTGACCCGAAAAAAACAGCGCCAAAAGTCTAATACCCCGTTGGCGCTGTTTTTTAAATGAATACATTACACAA TGTACAACTTTGCTGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAIKNTELINENRIDRSLRAFVGLACLQIAYFWLSGWWMTLFYLLSAVLFLTAAVGFCPLYRVLGLRSNNKQSTAGKVWL TIAALVFITQLVLGSYASHFFSKKFYLEDFNVMNNNYKQALFFTGQENRAKAIDNYDQLRINYARFKNKYLAYHPYALKG DGQFNDDLIRIEEILTETADNVRSGDLHQAHLMLEKVRPVFQNIFKRNNFSMLAVTLIDFHDTMELMLTAATLKDATQVK ALYPQVDKKLQAIEVEANDADIQAIRDNLETLFKLAKSGAVEQLTAQGKKLKSSFVKVYLQRG
Sequences:
>Translated_303_residues MAIKNTELINENRIDRSLRAFVGLACLQIAYFWLSGWWMTLFYLLSAVLFLTAAVGFCPLYRVLGLRSNNKQSTAGKVWL TIAALVFITQLVLGSYASHFFSKKFYLEDFNVMNNNYKQALFFTGQENRAKAIDNYDQLRINYARFKNKYLAYHPYALKG DGQFNDDLIRIEEILTETADNVRSGDLHQAHLMLEKVRPVFQNIFKRNNFSMLAVTLIDFHDTMELMLTAATLKDATQVK ALYPQVDKKLQAIEVEANDADIQAIRDNLETLFKLAKSGAVEQLTAQGKKLKSSFVKVYLQRG >Mature_302_residues AIKNTELINENRIDRSLRAFVGLACLQIAYFWLSGWWMTLFYLLSAVLFLTAAVGFCPLYRVLGLRSNNKQSTAGKVWLT IAALVFITQLVLGSYASHFFSKKFYLEDFNVMNNNYKQALFFTGQENRAKAIDNYDQLRINYARFKNKYLAYHPYALKGD GQFNDDLIRIEEILTETADNVRSGDLHQAHLMLEKVRPVFQNIFKRNNFSMLAVTLIDFHDTMELMLTAATLKDATQVKA LYPQVDKKLQAIEVEANDADIQAIRDNLETLFKLAKSGAVEQLTAQGKKLKSSFVKVYLQRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34702; Mature: 34570
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKNTELINENRIDRSLRAFVGLACLQIAYFWLSGWWMTLFYLLSAVLFLTAAVGFCPL CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRVLGLRSNNKQSTAGKVWLTIAALVFITQLVLGSYASHFFSKKFYLEDFNVMNNNYKQA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LFFTGQENRAKAIDNYDQLRINYARFKNKYLAYHPYALKGDGQFNDDLIRIEEILTETAD EEEECCCCCHHHHCCHHHHEEHHHHHCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHH NVRSGDLHQAHLMLEKVRPVFQNIFKRNNFSMLAVTLIDFHDTMELMLTAATLKDATQVK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH ALYPQVDKKLQAIEVEANDADIQAIRDNLETLFKLAKSGAVEQLTAQGKKLKSSFVKVYL HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QRG HCC >Mature Secondary Structure AIKNTELINENRIDRSLRAFVGLACLQIAYFWLSGWWMTLFYLLSAVLFLTAAVGFCPL CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRVLGLRSNNKQSTAGKVWLTIAALVFITQLVLGSYASHFFSKKFYLEDFNVMNNNYKQA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LFFTGQENRAKAIDNYDQLRINYARFKNKYLAYHPYALKGDGQFNDDLIRIEEILTETAD EEEECCCCCHHHHCCHHHHEEHHHHHCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHH NVRSGDLHQAHLMLEKVRPVFQNIFKRNNFSMLAVTLIDFHDTMELMLTAATLKDATQVK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH ALYPQVDKKLQAIEVEANDADIQAIRDNLETLFKLAKSGAVEQLTAQGKKLKSSFVKVYL HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH QRG HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA