| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is phnX
Identifier: 119946375
GI number: 119946375
Start: 3372695
End: 3373582
Strand: Direct
Name: phnX
Synonym: Ping_2749
Alternate gene names: 119946375
Gene position: 3372695-3373582 (Clockwise)
Preceding gene: 119946374
Following gene: 119946377
Centisome position: 73.97
GC content: 41.22
Gene sequence:
>888_bases ATGAACAGCACCATAAATAACGACATAAATAACGACATAAATAACGACATAAATAACGACATAAATAACACACAATCAAA CTCCCCTATTGAAGCAGTTATCTTTGACTGGGCCGGTACTATTGTTGACTTTGGCTCATTTGCACCAACCACTATTTTTG TGGAATCTTTTCAAAAAGAGTATGACTTTGCCATTACCCTGCAGGAAGCACGTGTACCCATGGGACTCGGTAAATGGGAT CATATTCAAGCGGTGGGTAAATTACCGAGTGTAGCAACCCGCTGGCAAGCACAGTTTGGTAAAGCCATGGACAATGCCGA TATTGACCAGATCTACAATACTTTTATTCCCCTGCAAAAAGTCAAAGTGGTTGATCATGCAGACCCTATTTTAAATGCGA TTAACGTGGTGAATGATTTAAAAAAACAGGGCATCAAAATTGGATCATGCAGCGGTTATCCGCGTGCCGTAATGGATGTA TTGATTCCTGCTGCTGCCGAAAATGGCTATTTACCCGATTGTGTTGTGGCCACTGACGATTTACCTTACGGTGGCCGACC TGCACCTCATATGGCCCTTAAAAATGTAATTGAACTTGGGGTTAACAGTGTAACAAACTGTATTAAAGTCGATGATTCGA CACCGGGTATTGAGGAAGGCCATAATGCAGGGATGTGGACGGTGGCACTTTTATTGTCAGGAAATGAAGCGGGATTAACG GCACAGGAATATCAACAGGCAAGTGTACAGACCTTGAATAAAGCGCGTGAAAAAGCACGTTTAATTATGAAAAAATCCAA TCCGCATTATTTGATTGATACTATTAACGATTTACCTGCTGTGATCAAAGAGATTGAGTTACGTTTAATCAAAGGTGAGC GTCCATAA
Upstream 100 bases:
>100_bases CCCCCGCTTATTATCAGCCACACACAATTACAGAATGCACTTGATCTCTTTGAACAAGCCCTTAAAAATATAACTCAGGA TTCACATTATGAAGAATGCC
Downstream 100 bases:
>100_bases CAATTACCCCTGAACCCTTATCTTAAATTAGAGGGCTGAAATAACTTAGCCCTCTAAACAAGTTGAGATAAAAGGTCTTT TTTTATCATTGTTCTATTTT
Product: phosphonoacetaldehyde hydrolase
Products: NA
Alternate protein names: Phosphonatase; Phosphonoacetaldehyde phosphonohydrolase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNSTINNDINNDINNDINNDINNTQSNSPIEAVIFDWAGTIVDFGSFAPTTIFVESFQKEYDFAITLQEARVPMGLGKWD HIQAVGKLPSVATRWQAQFGKAMDNADIDQIYNTFIPLQKVKVVDHADPILNAINVVNDLKKQGIKIGSCSGYPRAVMDV LIPAAAENGYLPDCVVATDDLPYGGRPAPHMALKNVIELGVNSVTNCIKVDDSTPGIEEGHNAGMWTVALLLSGNEAGLT AQEYQQASVQTLNKAREKARLIMKKSNPHYLIDTINDLPAVIKEIELRLIKGERP
Sequences:
>Translated_295_residues MNSTINNDINNDINNDINNDINNTQSNSPIEAVIFDWAGTIVDFGSFAPTTIFVESFQKEYDFAITLQEARVPMGLGKWD HIQAVGKLPSVATRWQAQFGKAMDNADIDQIYNTFIPLQKVKVVDHADPILNAINVVNDLKKQGIKIGSCSGYPRAVMDV LIPAAAENGYLPDCVVATDDLPYGGRPAPHMALKNVIELGVNSVTNCIKVDDSTPGIEEGHNAGMWTVALLLSGNEAGLT AQEYQQASVQTLNKAREKARLIMKKSNPHYLIDTINDLPAVIKEIELRLIKGERP >Mature_295_residues MNSTINNDINNDINNDINNDINNTQSNSPIEAVIFDWAGTIVDFGSFAPTTIFVESFQKEYDFAITLQEARVPMGLGKWD HIQAVGKLPSVATRWQAQFGKAMDNADIDQIYNTFIPLQKVKVVDHADPILNAINVVNDLKKQGIKIGSCSGYPRAVMDV LIPAAAENGYLPDCVVATDDLPYGGRPAPHMALKNVIELGVNSVTNCIKVDDSTPGIEEGHNAGMWTVALLLSGNEAGLT AQEYQQASVQTLNKAREKARLIMKKSNPHYLIDTINDLPAVIKEIELRLIKGERP
Specific function: Involved in phosphonate degradation
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PhnX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHNX_PSYIN (A1SY91)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944055.1 - ProteinModelPortal: A1SY91 - SMR: A1SY91 - STRING: A1SY91 - GeneID: 4626010 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2749 - eggNOG: COG0637 - HOGENOM: HBG289432 - OMA: DIHEMYE - ProtClustDB: PRK13478 - BioCyc: PING357804:PING_2749-MONOMER - HAMAP: MF_01375 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR006323 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01509 - TIGRFAMs: TIGR01422
Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784
EC number: =3.11.1.1
Molecular weight: Translated: 32328; Mature: 32328
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: ACT_SITE 36-36 ACT_SITE 78-78
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTINNDINNDINNDINNDINNTQSNSPIEAVIFDWAGTIVDFGSFAPTTIFVESFQKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHH YDFAITLQEARVPMGLGKWDHIQAVGKLPSVATRWQAQFGKAMDNADIDQIYNTFIPLQK CCEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH VKVVDHADPILNAINVVNDLKKQGIKIGSCSGYPRAVMDVLIPAAAENGYLPDCVVATDD HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC LPYGGRPAPHMALKNVIELGVNSVTNCIKVDDSTPGIEEGHNAGMWTVALLLSGNEAGLT CCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCC AQEYQQASVQTLNKAREKARLIMKKSNPHYLIDTINDLPAVIKEIELRLIKGERP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNSTINNDINNDINNDINNDINNTQSNSPIEAVIFDWAGTIVDFGSFAPTTIFVESFQKE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHH YDFAITLQEARVPMGLGKWDHIQAVGKLPSVATRWQAQFGKAMDNADIDQIYNTFIPLQK CCEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH VKVVDHADPILNAINVVNDLKKQGIKIGSCSGYPRAVMDVLIPAAAENGYLPDCVVATDD HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC LPYGGRPAPHMALKNVIELGVNSVTNCIKVDDSTPGIEEGHNAGMWTVALLLSGNEAGLT CCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCC AQEYQQASVQTLNKAREKARLIMKKSNPHYLIDTINDLPAVIKEIELRLIKGERP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA