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The map label for this gene is ycjL [C]

Identifier: 119946303

GI number: 119946303

Start: 3275184

End: 3275873

Strand: Reverse

Name: ycjL [C]

Synonym: Ping_2671

Alternate gene names: 119946303

Gene position: 3275873-3275184 (Counterclockwise)

Preceding gene: 119946304

Following gene: 119946300

Centisome position: 71.85

GC content: 30.14

Gene sequence:

>690_bases
ATGGATAAAAAGCCATTAGTTGGAATATGTCTTCCTGATAAGGGTAATATTTTTGCTTATATTTTTATCAGGTTGAATTT
ATACATGCAAAAAGCGAAATGGATTAGCCTAAGACCTTCTTTGGATAATATAGATTTTGACGAACTTGATGCATTACTTT
TAAGTGGGGGAAATGACATAGATCCTATACTGTATGGTGGCGAAAAAGATGCCCATAATACTTCGCTAGATAAGAAAAGA
GATTGTTTTGAACTTGAAATGATAGATAAAGCTTACAAAAAAAAGATACCTATTTTAGGTATTTGTAGAGGAGCTCAACT
TATAAATATTTATTTTAAGGGAAGTTTGTATCCTACGATATTAGATATTGATGAGTATATAATACATAAAAATTCTATTT
TTCCCATAAAAAAGGTAGTTGTAAAAATATTTTCAAAACTTTTTACAATAGTTCAACACAAGGAAATTGTTGCAAACAGC
ATACATAATCAAGCTATAAAAGAGGTCGGTGAAAATTTAAAGGTTTCTGCAACAGATGACACAATAATAGAAGCGATAGA
AAAAAAAGATTATCCCTTTTTGTTAGGCGTTCAGTGGCATCCTGAATATCTTCTTTATTTAAAGGAGCATAGAAATATCT
TTAGAAGCTTTGTCAAAAGTAGTCTTTCTTCTCGATGTGTGGATTCGTAA

Upstream 100 bases:

>100_bases
TGGCAAATGATAAAAACGCTTTAAAAGATTTATCCAAAGAGTATTTGAACTATTTAAATAATTTTTTAAATTTTAAAAAT
TGGCAGAGCAGGATGGAAAA

Downstream 100 bases:

>100_bases
CTGAATTTAAGTATTTTCTGCCTCATCAAAAGTCATTTTTTTCTTGGTTTGGAGGAATAAAAACGTATCCCGGGCACAAT
GGCCCCAAGTGCGACAGGCA

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDKKPLVGICLPDKGNIFAYIFIRLNLYMQKAKWISLRPSLDNIDFDELDALLLSGGNDIDPILYGGEKDAHNTSLDKKR
DCFELEMIDKAYKKKIPILGICRGAQLINIYFKGSLYPTILDIDEYIIHKNSIFPIKKVVVKIFSKLFTIVQHKEIVANS
IHNQAIKEVGENLKVSATDDTIIEAIEKKDYPFLLGVQWHPEYLLYLKEHRNIFRSFVKSSLSSRCVDS

Sequences:

>Translated_229_residues
MDKKPLVGICLPDKGNIFAYIFIRLNLYMQKAKWISLRPSLDNIDFDELDALLLSGGNDIDPILYGGEKDAHNTSLDKKR
DCFELEMIDKAYKKKIPILGICRGAQLINIYFKGSLYPTILDIDEYIIHKNSIFPIKKVVVKIFSKLFTIVQHKEIVANS
IHNQAIKEVGENLKVSATDDTIIEAIEKKDYPFLLGVQWHPEYLLYLKEHRNIFRSFVKSSLSSRCVDS
>Mature_229_residues
MDKKPLVGICLPDKGNIFAYIFIRLNLYMQKAKWISLRPSLDNIDFDELDALLLSGGNDIDPILYGGEKDAHNTSLDKKR
DCFELEMIDKAYKKKIPILGICRGAQLINIYFKGSLYPTILDIDEYIIHKNSIFPIKKVVVKIFSKLFTIVQHKEIVANS
IHNQAIKEVGENLKVSATDDTIIEAIEKKDYPFLLGVQWHPEYLLYLKEHRNIFRSFVKSSLSSRCVDS

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=176, Percent_Identity=31.8181818181818, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 26310; Mature: 26310

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKPLVGICLPDKGNIFAYIFIRLNLYMQKAKWISLRPSLDNIDFDELDALLLSGGNDI
CCCCCEEEEEECCCCCEEEEEEEEEHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCC
DPILYGGEKDAHNTSLDKKRDCFELEMIDKAYKKKIPILGICRGAQLINIYFKGSLYPTI
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEE
LDIDEYIIHKNSIFPIKKVVVKIFSKLFTIVQHKEIVANSIHNQAIKEVGENLKVSATDD
ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCH
TIIEAIEKKDYPFLLGVQWHPEYLLYLKEHRNIFRSFVKSSLSSRCVDS
HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKKPLVGICLPDKGNIFAYIFIRLNLYMQKAKWISLRPSLDNIDFDELDALLLSGGNDI
CCCCCEEEEEECCCCCEEEEEEEEEHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCC
DPILYGGEKDAHNTSLDKKRDCFELEMIDKAYKKKIPILGICRGAQLINIYFKGSLYPTI
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEE
LDIDEYIIHKNSIFPIKKVVVKIFSKLFTIVQHKEIVANSIHNQAIKEVGENLKVSATDD
ECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCH
TIIEAIEKKDYPFLLGVQWHPEYLLYLKEHRNIFRSFVKSSLSSRCVDS
HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]