| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yhhW [C]
Identifier: 119946271
GI number: 119946271
Start: 3231072
End: 3232091
Strand: Reverse
Name: yhhW [C]
Synonym: Ping_2634
Alternate gene names: 119946271
Gene position: 3232091-3231072 (Counterclockwise)
Preceding gene: 119946272
Following gene: 119946270
Centisome position: 70.89
GC content: 40.88
Gene sequence:
>1020_bases ATGGCATCAACAGCAATTATTAAAACACTTAAGTTAACCACACCGTGGCAAACCTTAGATCCCTTCTTATTTTGTGTTCA TCATCTTGATAATTACCCCAAAGGAGATGGAAAAATGGGGCCATCTTTACCATTGCAGGGACGTGAACTGGGCAATGATT TTAGCGGAAAATCAGGCTTTAGCATGTATCACGGATCCACTGTACCAGGTTTTCCTGTCCATCCTCATCGAGGATTTGAA ACGGTAACCGTGGGGCGTCGTGGTTTTATTGATCATTTTGATTCATTAGGCGGATACGGACGTTTTGGCAACGGTGATAC ACAATGGATGACAGCTGGAAAGGGCGTGCAACATTCTGAAATGTTTCCGCTTGTCCACACCGAAAAAGAAAACCCAACTG AATTATTTCAAGTTTGGTTAAATTTACCCCGAAAAAATAAGTTTGTTGATCCTGAATATAAAATGCTTTGGCATGAAGAT ATTCCCATTATTTCTTATTTTGATGATGATCAACGTCTGACTCAAATAGATCTGATTGCCGGACAGTATGGGAAGATAAA AGCATTACCTCCAACTAACGCTTCATGGGCTGCAGATCCTGATAATGAAGTTTCTATTTGGACCATAAAAATGGCGGCTA ATGCAATCTGGGCGCTACCGGCTGGATCAAGTGATTTAAATCGTTGCTTGTATTTTTATGCTGGAGCGGGGCTGAAAATT GATGGCGAGCTTATCCCTGTTAATCACCGTGTTGATTTAATTTCGGATAAAAAAGTGACATTGTCAAACAGCAGTAACAC TGTAGTTGAAATTTTGTTATTACAGGGGCGTCCAATTAATGAGCCCGTTGTCCAACATGGGCCTTTTGTGATGAATACTA CAGATGAGATATACAAAACCTTTGCAGACTACCGTAAAACAAATTTTGGCGGCTGGCCATGGCCGAGTTCTGCACCTGTC AATCCTCAAAAAACTGGTCGTTTTTCGAATGATGGACAGGGTAATAAAGAGGTAAGATAA
Upstream 100 bases:
>100_bases GTATTATCCCTTTTGAAAATGGACTTATTTCATTAATAATTCTTTGCCCTCTGTTTTCATCCTGTTACATTTAGTATTCT TTTCGTGGATTGAGGTATTT
Downstream 100 bases:
>100_bases TATATAAAATTTTTGCTTTAAATTCGTGATAATAGCGATCAGCTTAATATTCTGTTCCATTGCTCGAACTATTTTACGCT TATCCACACCAATCAAATGT
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGFSMYHGSTVPGFPVHPHRGFE TVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSEMFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHED IPIISYFDDDQRLTQIDLIAGQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKTFADYRKTNFGGWPWPSSAPV NPQKTGRFSNDGQGNKEVR
Sequences:
>Translated_339_residues MASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGFSMYHGSTVPGFPVHPHRGFE TVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSEMFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHED IPIISYFDDDQRLTQIDLIAGQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKTFADYRKTNFGGWPWPSSAPV NPQKTGRFSNDGQGNKEVR >Mature_338_residues ASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGFSMYHGSTVPGFPVHPHRGFET VTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSEMFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHEDI PIISYFDDDQRLTQIDLIAGQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKID GELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKTFADYRKTNFGGWPWPSSAPVN PQKTGRFSNDGQGNKEVR
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=257, Percent_Identity=32.295719844358, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI4505823, Length=257, Percent_Identity=32.295719844358, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 37881; Mature: 37750
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGF CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC SMYHGSTVPGFPVHPHRGFETVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSE EEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC MFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHEDIPIISYFDDDQRLTQIDLIA CCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEEEE GQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI CCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHEEEEEECCCEEE DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKT CCEEEECCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCCHHHHCCCEEECCHHHHHHH FADYRKTNFGGWPWPSSAPVNPQKTGRFSNDGQGNKEVR HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGF CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC SMYHGSTVPGFPVHPHRGFETVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSE EEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC MFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHEDIPIISYFDDDQRLTQIDLIA CCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEEEE GQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI CCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHEEEEEECCCEEE DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKT CCEEEECCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCCHHHHCCCEEECCHHHHHHH FADYRKTNFGGWPWPSSAPVNPQKTGRFSNDGQGNKEVR HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]