Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 119946271

GI number: 119946271

Start: 3231072

End: 3232091

Strand: Reverse

Name: yhhW [C]

Synonym: Ping_2634

Alternate gene names: 119946271

Gene position: 3232091-3231072 (Counterclockwise)

Preceding gene: 119946272

Following gene: 119946270

Centisome position: 70.89

GC content: 40.88

Gene sequence:

>1020_bases
ATGGCATCAACAGCAATTATTAAAACACTTAAGTTAACCACACCGTGGCAAACCTTAGATCCCTTCTTATTTTGTGTTCA
TCATCTTGATAATTACCCCAAAGGAGATGGAAAAATGGGGCCATCTTTACCATTGCAGGGACGTGAACTGGGCAATGATT
TTAGCGGAAAATCAGGCTTTAGCATGTATCACGGATCCACTGTACCAGGTTTTCCTGTCCATCCTCATCGAGGATTTGAA
ACGGTAACCGTGGGGCGTCGTGGTTTTATTGATCATTTTGATTCATTAGGCGGATACGGACGTTTTGGCAACGGTGATAC
ACAATGGATGACAGCTGGAAAGGGCGTGCAACATTCTGAAATGTTTCCGCTTGTCCACACCGAAAAAGAAAACCCAACTG
AATTATTTCAAGTTTGGTTAAATTTACCCCGAAAAAATAAGTTTGTTGATCCTGAATATAAAATGCTTTGGCATGAAGAT
ATTCCCATTATTTCTTATTTTGATGATGATCAACGTCTGACTCAAATAGATCTGATTGCCGGACAGTATGGGAAGATAAA
AGCATTACCTCCAACTAACGCTTCATGGGCTGCAGATCCTGATAATGAAGTTTCTATTTGGACCATAAAAATGGCGGCTA
ATGCAATCTGGGCGCTACCGGCTGGATCAAGTGATTTAAATCGTTGCTTGTATTTTTATGCTGGAGCGGGGCTGAAAATT
GATGGCGAGCTTATCCCTGTTAATCACCGTGTTGATTTAATTTCGGATAAAAAAGTGACATTGTCAAACAGCAGTAACAC
TGTAGTTGAAATTTTGTTATTACAGGGGCGTCCAATTAATGAGCCCGTTGTCCAACATGGGCCTTTTGTGATGAATACTA
CAGATGAGATATACAAAACCTTTGCAGACTACCGTAAAACAAATTTTGGCGGCTGGCCATGGCCGAGTTCTGCACCTGTC
AATCCTCAAAAAACTGGTCGTTTTTCGAATGATGGACAGGGTAATAAAGAGGTAAGATAA

Upstream 100 bases:

>100_bases
GTATTATCCCTTTTGAAAATGGACTTATTTCATTAATAATTCTTTGCCCTCTGTTTTCATCCTGTTACATTTAGTATTCT
TTTCGTGGATTGAGGTATTT

Downstream 100 bases:

>100_bases
TATATAAAATTTTTGCTTTAAATTCGTGATAATAGCGATCAGCTTAATATTCTGTTCCATTGCTCGAACTATTTTACGCT
TATCCACACCAATCAAATGT

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGFSMYHGSTVPGFPVHPHRGFE
TVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSEMFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHED
IPIISYFDDDQRLTQIDLIAGQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI
DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKTFADYRKTNFGGWPWPSSAPV
NPQKTGRFSNDGQGNKEVR

Sequences:

>Translated_339_residues
MASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGFSMYHGSTVPGFPVHPHRGFE
TVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSEMFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHED
IPIISYFDDDQRLTQIDLIAGQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI
DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKTFADYRKTNFGGWPWPSSAPV
NPQKTGRFSNDGQGNKEVR
>Mature_338_residues
ASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGFSMYHGSTVPGFPVHPHRGFET
VTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSEMFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHEDI
PIISYFDDDQRLTQIDLIAGQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKID
GELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKTFADYRKTNFGGWPWPSSAPVN
PQKTGRFSNDGQGNKEVR

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=257, Percent_Identity=32.295719844358, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI4505823, Length=257, Percent_Identity=32.295719844358, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 37881; Mature: 37750

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGF
CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
SMYHGSTVPGFPVHPHRGFETVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSE
EEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
MFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHEDIPIISYFDDDQRLTQIDLIA
CCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEEEE
GQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI
CCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHEEEEEECCCEEE
DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKT
CCEEEECCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCCHHHHCCCEEECCHHHHHHH
FADYRKTNFGGWPWPSSAPVNPQKTGRFSNDGQGNKEVR
HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASTAIIKTLKLTTPWQTLDPFLFCVHHLDNYPKGDGKMGPSLPLQGRELGNDFSGKSGF
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
SMYHGSTVPGFPVHPHRGFETVTVGRRGFIDHFDSLGGYGRFGNGDTQWMTAGKGVQHSE
EEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
MFPLVHTEKENPTELFQVWLNLPRKNKFVDPEYKMLWHEDIPIISYFDDDQRLTQIDLIA
CCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEEEE
GQYGKIKALPPTNASWAADPDNEVSIWTIKMAANAIWALPAGSSDLNRCLYFYAGAGLKI
CCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHEEEEEECCCEEE
DGELIPVNHRVDLISDKKVTLSNSSNTVVEILLLQGRPINEPVVQHGPFVMNTTDEIYKT
CCEEEECCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCCHHHHCCCEEECCHHHHHHH
FADYRKTNFGGWPWPSSAPVNPQKTGRFSNDGQGNKEVR
HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]