| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946262
Identifier: 119946262
GI number: 119946262
Start: 3218315
End: 3219013
Strand: Direct
Name: 119946262
Synonym: Ping_2624
Alternate gene names: NA
Gene position: 3218315-3219013 (Clockwise)
Preceding gene: 119946260
Following gene: 119946263
Centisome position: 70.58
GC content: 38.05
Gene sequence:
>699_bases ATGGCAAATTTCAATACTCACTTCAACGTAGCCGCTATATCAACAGGTCTCGCCTCTGCAGTACTACTATCAGCAGAACA TATAAACATTAATACTGCATTGTGGCTTTGGTGTTTAGGCACTATCGGGGGATTATTACCCGACATCGATGCTGACAACT CAACATCACTTGATATTGTTTTTAATATTTTTGCTGCTGTTGCCCTATTAATGGTGCTGCACTACATTACTGGGGAGCAC TTTAGAGAGATTCAATTTATTGAGTTACTGGCAATACCTTTCGGTGTTTATGGAATATTAAAATGGCTAATAAGACCAAT TTTTGAAAAAATAACGGTGCATCGTGGCAGTTGTCATTCACTGTTATTTTTATTCTTGTGCGCACTCTTAACAATTCAGA TCACTTGGGTATTTAATGACAATTATTTAACTGCATCGAGCTTTCATGCCTGGCTGTCGGGAGGATTTATTCTCTTTGGC GGGCTTATCCACTTACTTTTAGATGAAATGTACAGTGTTGAGTTATCTAATCTCAGGGTAAAACGTTCCTTTGGTACAGC CTTAAAAATAGCGGACTTTAGAAATAAAAGTGCAACGCTAATGATGCTAGCTGCAATTATTGCACTAAGTTATATCGCTC CTGAAAGCGACTCTACGATTAATACACTAACAGACTGGTCAAGCTTTAAAGTTTGGTGA
Upstream 100 bases:
>100_bases AAAAAATAACAATAAAAAGAGTAACAATATACAAACCCATGTCACTTATAATACAAAATACAGGTAGAATGCGGGTTGAA TATTTTATCTAAGAGAAGTA
Downstream 100 bases:
>100_bases TAGCAACACAGAAGCCAAGAATACAGCTAAAAAATCTGATCTTGTAAAATTGGATTAGGTTACAAAAAGGGAGCAACCTG CTCCCTATTCCGGTCTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MANFNTHFNVAAISTGLASAVLLSAEHININTALWLWCLGTIGGLLPDIDADNSTSLDIVFNIFAAVALLMVLHYITGEH FREIQFIELLAIPFGVYGILKWLIRPIFEKITVHRGSCHSLLFLFLCALLTIQITWVFNDNYLTASSFHAWLSGGFILFG GLIHLLLDEMYSVELSNLRVKRSFGTALKIADFRNKSATLMMLAAIIALSYIAPESDSTINTLTDWSSFKVW
Sequences:
>Translated_232_residues MANFNTHFNVAAISTGLASAVLLSAEHININTALWLWCLGTIGGLLPDIDADNSTSLDIVFNIFAAVALLMVLHYITGEH FREIQFIELLAIPFGVYGILKWLIRPIFEKITVHRGSCHSLLFLFLCALLTIQITWVFNDNYLTASSFHAWLSGGFILFG GLIHLLLDEMYSVELSNLRVKRSFGTALKIADFRNKSATLMMLAAIIALSYIAPESDSTINTLTDWSSFKVW >Mature_231_residues ANFNTHFNVAAISTGLASAVLLSAEHININTALWLWCLGTIGGLLPDIDADNSTSLDIVFNIFAAVALLMVLHYITGEHF REIQFIELLAIPFGVYGILKWLIRPIFEKITVHRGSCHSLLFLFLCALLTIQITWVFNDNYLTASSFHAWLSGGFILFGG LIHLLLDEMYSVELSNLRVKRSFGTALKIADFRNKSATLMMLAAIIALSYIAPESDSTINTLTDWSSFKVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25848; Mature: 25716
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFNTHFNVAAISTGLASAVLLSAEHININTALWLWCLGTIGGLLPDIDADNSTSLDIV CCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH FNIFAAVALLMVLHYITGEHFREIQFIELLAIPFGVYGILKWLIRPIFEKITVHRGSCHS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLFLFLCALLTIQITWVFNDNYLTASSFHAWLSGGFILFGGLIHLLLDEMYSVELSNLRV HHHHHHHHHHHEEEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE KRSFGTALKIADFRNKSATLMMLAAIIALSYIAPESDSTINTLTDWSSFKVW ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure ANFNTHFNVAAISTGLASAVLLSAEHININTALWLWCLGTIGGLLPDIDADNSTSLDIV CCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH FNIFAAVALLMVLHYITGEHFREIQFIELLAIPFGVYGILKWLIRPIFEKITVHRGSCHS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLFLFLCALLTIQITWVFNDNYLTASSFHAWLSGGFILFGGLIHLLLDEMYSVELSNLRV HHHHHHHHHHHEEEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE KRSFGTALKIADFRNKSATLMMLAAIIALSYIAPESDSTINTLTDWSSFKVW ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA