| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yhcB [C]
Identifier: 119946102
GI number: 119946102
Start: 2998348
End: 2998962
Strand: Direct
Name: yhcB [C]
Synonym: Ping_2452
Alternate gene names: 119946102
Gene position: 2998348-2998962 (Clockwise)
Preceding gene: 119946099
Following gene: 119946103
Centisome position: 65.76
GC content: 45.69
Gene sequence:
>615_bases ATGACAGAAATAAGCGGAATGTTGATTTTTATTATCAGCGGATTTGTTGGTGGCATCATCGGTTTTGTTATTAGTCGTAT AACCTCAGGCAGCAGGCAACAAGGGCAGAGTAATACCAAAGCAGAGCTGGACAAGACCAAAGCTGAGCTGGACAAGACCA AAGCTGAGCTGGACAAGACCAAAGCAGAGCTGGACAAGACCAAAGCTGAGCTGGACAAGACCAAAGCTGAGCTGGACAAG ACCAAAGCTGAGCTGGACAAGACCAGAGCTGAGCTGGACAAGACCAAAGTAGAACTGGATAATTACAAATTTCAGGTCAG TAACCACTTTTCCGACAGCGCTAAACTGATGGGACAGATCGCCAGCAGTTATCAAGCGTTGTATACCCATATGGCTGGCC AATCGAAGGCTCTGCTCGACGCGAACAAGACTGGTGTGCCCTTTCCGCAACTGGAAATACCACTTGCAAAAAAATCGGCA CAAGAAACTGTGGAAGAAGCACTGGCAGCAAAAAAAGAAGCATCACAATCAGATACTGCGAAAAAGATTCGCGAGATAAA AGCTAAAGAGGTTCTTGAGATCAAAGCGAAAGATTGGATGCTCCAAATCGAATAA
Upstream 100 bases:
>100_bases TACTTTGACTAAAGTTTTTCTGCATCGTCTTAATCTATATTATTCAAATAGTTATACCGATGACGTGGTGGTTTATTATA TATTATATTAAGGAGTGGAT
Downstream 100 bases:
>100_bases TTAAGAGATTACCCATTCAAGTGAGCTTGCATTACGATCACAGTAATAACCTTGAACCTTGACTATGATTAATCCGCTGA TTAATCATAGTCAGATACGA
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTEISGMLIFIISGFVGGIIGFVISRITSGSRQQGQSNTKAELDKTKAELDKTKAELDKTKAELDKTKAELDKTKAELDK TKAELDKTRAELDKTKVELDNYKFQVSNHFSDSAKLMGQIASSYQALYTHMAGQSKALLDANKTGVPFPQLEIPLAKKSA QETVEEALAAKKEASQSDTAKKIREIKAKEVLEIKAKDWMLQIE
Sequences:
>Translated_204_residues MTEISGMLIFIISGFVGGIIGFVISRITSGSRQQGQSNTKAELDKTKAELDKTKAELDKTKAELDKTKAELDKTKAELDK TKAELDKTRAELDKTKVELDNYKFQVSNHFSDSAKLMGQIASSYQALYTHMAGQSKALLDANKTGVPFPQLEIPLAKKSA QETVEEALAAKKEASQSDTAKKIREIKAKEVLEIKAKDWMLQIE >Mature_203_residues TEISGMLIFIISGFVGGIIGFVISRITSGSRQQGQSNTKAELDKTKAELDKTKAELDKTKAELDKTKAELDKTKAELDKT KAELDKTRAELDKTKVELDNYKFQVSNHFSDSAKLMGQIASSYQALYTHMAGQSKALLDANKTGVPFPQLEIPLAKKSAQ ETVEEALAAKKEASQSDTAKKIREIKAKEVLEIKAKDWMLQIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22540; Mature: 22409
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISGMLIFIISGFVGGIIGFVISRITSGSRQQGQSNTKAELDKTKAELDKTKAELDKT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KAELDKTKAELDKTKAELDKTKAELDKTRAELDKTKVELDNYKFQVSNHFSDSAKLMGQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH ASSYQALYTHMAGQSKALLDANKTGVPFPQLEIPLAKKSAQETVEEALAAKKEASQSDTA HHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH KKIREIKAKEVLEIKAKDWMLQIE HHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure TEISGMLIFIISGFVGGIIGFVISRITSGSRQQGQSNTKAELDKTKAELDKTKAELDKT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHH KAELDKTKAELDKTKAELDKTKAELDKTRAELDKTKVELDNYKFQVSNHFSDSAKLMGQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH ASSYQALYTHMAGQSKALLDANKTGVPFPQLEIPLAKKSAQETVEEALAAKKEASQSDTA HHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH KKIREIKAKEVLEIKAKDWMLQIE HHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA