| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945789
Identifier: 119945789
GI number: 119945789
Start: 2589212
End: 2590942
Strand: Reverse
Name: 119945789
Synonym: Ping_2125
Alternate gene names: NA
Gene position: 2590942-2589212 (Counterclockwise)
Preceding gene: 119945790
Following gene: 119945788
Centisome position: 56.82
GC content: 45.58
Gene sequence:
>1731_bases ATGGATGCAGATCGTGCTACCCGCACTGAAGCAACACTGAGAAAGGCAGATGTTGTCATGGCGCCGGAAAGGCTGGGAGC TATGCACCAGACTAGAATCAGCTTTGTCCGAACGTTAATTCGTAAAATGGCACAACAGCAATGGAAAGTCAGCAAGCAGG AATGGCAACTTTGTCCGCAGGGTTTTGGCCATGTAATTTACAAATTGGCGACACCTCATCATGTTTATCACCTGGTTGTC TTTTGTAATGAAATAGCCGACTATGAGCGCAATGATCGTGTTATTGCTGAAAAATGGGATGTCACCTTTGCCCTTGTGTA TGGCTATGTTGATGAGAGTTTACTTGAAAAACTCAGATCTAATGTCCCGTTACAGGAAGCGGGCCGTAATCCAAATAATG TCTTAGTATTGGCGAGAGCAAACAAAAGTGTGCGCGTGTTTGAACATATTGTCAGTCACCTTGCGAAAGGTGTTCAACCA AACCCGAAAGATCTTGCTGAGGTGTGCTATATTCTTCGTACAACAGCGGTTTACGGTAATGGAAAATTTGGTATAGCAGA TTTCAAATTGCTAGAAAAAAATCCAGATTTCGAGCAGTCGTTCAGCGCTCAAATGTGTGCAGTATACCTGTTAAGATCAT TCAGCCTGGATTGGGTAAACTATCTGGCAACACAGCGAGGCGGTGAACAGGCAACGAAACTGCATCGTGAGCTGCAACGC TATTTAGGGGTAGGAAATGCGACGGGTCTGGGCATGGCACCCTATCTTATCAATCACCCGTGCACTGTTGACCAGTGGAT GACTACCCGGGAAACTGCGTTGGCGGCGGTACTCGCGTGTGCGACGGAGGCAGGTAAATTTGCGCCGTTACAAGCTTTGC TGCAAAAAGCCATTCGTCACCTTGAACAGATCATGACCATTAACGAAACGCAACAAAAACTCAATGCAATTGCGGTCGGT GAGCTAAAACATATGCACGAAAATTTAGCAACTTTGGTGGCGCAAAGTCAGTCTTGGGGGGATCTGTTAGCAGACTCACA ACATTTGAGTTTGGAAACCCAGGAAATCCTACTGGCCTGCTTGATGGAACTTTATCCTGAATTGGTGGATGTTTATCAAG AACAGATGAATTGTGATGAAACGCTCTCTCTGCCGAGTGGTAAAAAAATTCAGAATCTATTGCTGACTCTGGAAAAAAAC TATCGTTGGGCGATCAATACCGATTTCAGTCTGGCTGAAAACCAGTACTGGTTCTGGTATCGCTCTCAAGACAAAGAAGA ACCAAGACTTGGTGTACGTGGAGAAGAGCCGGGTGATGATCGAGAATCACTTTTAGATATAGGTCGTCAAGCGAATCGCT TATATCATGCGCTACTTGAACAAGCGCCAGAACTATCCTTGGTTGAATTCCTTGTTCAATATCCGCAATATCGCACCATA GCGCGACGGGTATGGACTATGGGTCACAAAGCGATGGGCGATATTCAAATGAACGTGTTGCATAAAGCGTCGCTTCCAAT GCATTTACTACGCTGTAAATTATCCATGTTTGGAGCGACAACCTTTGACCCGCGCTCAGATCGCTGGGTGCGGGTGACAT TCTTCCAGGGTGCACCTTTGTTGGATGAAATTCACAGTCAAACTGCTCAGGACGATTGGTTGTTTCCATTATTACCTAAC CTGAACGAATTGTTGAATAATGATCAGCCGCTCGGGAGCAAAGGGTTATGA
Upstream 100 bases:
>100_bases TTGGTGTCAATACATCAGTCGAAGTAATGCTCAGGGGGCGAGTTCGCTCGCCCTAACTGGAAGATCAAATACTTTAATAA CTAAAATGGTGGTGAGGAAT
Downstream 100 bases:
>100_bases TTGTTTCTCACAATGAGTTAGTGGCCGCTGTAAACAAAGCATTCCTTGGTATGCGCCGTGCCTGTGGTGAAGCTGATATC ATCGCAAATATGGTTGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MDADRATRTEATLRKADVVMAPERLGAMHQTRISFVRTLIRKMAQQQWKVSKQEWQLCPQGFGHVIYKLATPHHVYHLVV FCNEIADYERNDRVIAEKWDVTFALVYGYVDESLLEKLRSNVPLQEAGRNPNNVLVLARANKSVRVFEHIVSHLAKGVQP NPKDLAEVCYILRTTAVYGNGKFGIADFKLLEKNPDFEQSFSAQMCAVYLLRSFSLDWVNYLATQRGGEQATKLHRELQR YLGVGNATGLGMAPYLINHPCTVDQWMTTRETALAAVLACATEAGKFAPLQALLQKAIRHLEQIMTINETQQKLNAIAVG ELKHMHENLATLVAQSQSWGDLLADSQHLSLETQEILLACLMELYPELVDVYQEQMNCDETLSLPSGKKIQNLLLTLEKN YRWAINTDFSLAENQYWFWYRSQDKEEPRLGVRGEEPGDDRESLLDIGRQANRLYHALLEQAPELSLVEFLVQYPQYRTI ARRVWTMGHKAMGDIQMNVLHKASLPMHLLRCKLSMFGATTFDPRSDRWVRVTFFQGAPLLDEIHSQTAQDDWLFPLLPN LNELLNNDQPLGSKGL
Sequences:
>Translated_576_residues MDADRATRTEATLRKADVVMAPERLGAMHQTRISFVRTLIRKMAQQQWKVSKQEWQLCPQGFGHVIYKLATPHHVYHLVV FCNEIADYERNDRVIAEKWDVTFALVYGYVDESLLEKLRSNVPLQEAGRNPNNVLVLARANKSVRVFEHIVSHLAKGVQP NPKDLAEVCYILRTTAVYGNGKFGIADFKLLEKNPDFEQSFSAQMCAVYLLRSFSLDWVNYLATQRGGEQATKLHRELQR YLGVGNATGLGMAPYLINHPCTVDQWMTTRETALAAVLACATEAGKFAPLQALLQKAIRHLEQIMTINETQQKLNAIAVG ELKHMHENLATLVAQSQSWGDLLADSQHLSLETQEILLACLMELYPELVDVYQEQMNCDETLSLPSGKKIQNLLLTLEKN YRWAINTDFSLAENQYWFWYRSQDKEEPRLGVRGEEPGDDRESLLDIGRQANRLYHALLEQAPELSLVEFLVQYPQYRTI ARRVWTMGHKAMGDIQMNVLHKASLPMHLLRCKLSMFGATTFDPRSDRWVRVTFFQGAPLLDEIHSQTAQDDWLFPLLPN LNELLNNDQPLGSKGL >Mature_576_residues MDADRATRTEATLRKADVVMAPERLGAMHQTRISFVRTLIRKMAQQQWKVSKQEWQLCPQGFGHVIYKLATPHHVYHLVV FCNEIADYERNDRVIAEKWDVTFALVYGYVDESLLEKLRSNVPLQEAGRNPNNVLVLARANKSVRVFEHIVSHLAKGVQP NPKDLAEVCYILRTTAVYGNGKFGIADFKLLEKNPDFEQSFSAQMCAVYLLRSFSLDWVNYLATQRGGEQATKLHRELQR YLGVGNATGLGMAPYLINHPCTVDQWMTTRETALAAVLACATEAGKFAPLQALLQKAIRHLEQIMTINETQQKLNAIAVG ELKHMHENLATLVAQSQSWGDLLADSQHLSLETQEILLACLMELYPELVDVYQEQMNCDETLSLPSGKKIQNLLLTLEKN YRWAINTDFSLAENQYWFWYRSQDKEEPRLGVRGEEPGDDRESLLDIGRQANRLYHALLEQAPELSLVEFLVQYPQYRTI ARRVWTMGHKAMGDIQMNVLHKASLPMHLLRCKLSMFGATTFDPRSDRWVRVTFFQGAPLLDEIHSQTAQDDWLFPLLPN LNELLNNDQPLGSKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65793; Mature: 65793
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADRATRTEATLRKADVVMAPERLGAMHQTRISFVRTLIRKMAQQQWKVSKQEWQLCPQ CCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHH GFGHVIYKLATPHHVYHLVVFCNEIADYERNDRVIAEKWDVTFALVYGYVDESLLEKLRS HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHCEEHHHHHHHHHHHHHHHHHH NVPLQEAGRNPNNVLVLARANKSVRVFEHIVSHLAKGVQPNPKDLAEVCYILRTTAVYGN CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC GKFGIADFKLLEKNPDFEQSFSAQMCAVYLLRSFSLDWVNYLATQRGGEQATKLHRELQR CCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH YLGVGNATGLGMAPYLINHPCTVDQWMTTRETALAAVLACATEAGKFAPLQALLQKAIRH HHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LEQIMTINETQQKLNAIAVGELKHMHENLATLVAQSQSWGDLLADSQHLSLETQEILLAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHH LMELYPELVDVYQEQMNCDETLSLPSGKKIQNLLLTLEKNYRWAINTDFSLAENQYWFWY HHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCEEEEE RSQDKEEPRLGVRGEEPGDDRESLLDIGRQANRLYHALLEQAPELSLVEFLVQYPQYRTI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH ARRVWTMGHKAMGDIQMNVLHKASLPMHLLRCKLSMFGATTFDPRSDRWVRVTFFQGAPL HHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCH LDEIHSQTAQDDWLFPLLPNLNELLNNDQPLGSKGL HHHHHHHCCCCCCCCHHHCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MDADRATRTEATLRKADVVMAPERLGAMHQTRISFVRTLIRKMAQQQWKVSKQEWQLCPQ CCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHH GFGHVIYKLATPHHVYHLVVFCNEIADYERNDRVIAEKWDVTFALVYGYVDESLLEKLRS HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHCEEHHHHHHHHHHHHHHHHHH NVPLQEAGRNPNNVLVLARANKSVRVFEHIVSHLAKGVQPNPKDLAEVCYILRTTAVYGN CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC GKFGIADFKLLEKNPDFEQSFSAQMCAVYLLRSFSLDWVNYLATQRGGEQATKLHRELQR CCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH YLGVGNATGLGMAPYLINHPCTVDQWMTTRETALAAVLACATEAGKFAPLQALLQKAIRH HHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LEQIMTINETQQKLNAIAVGELKHMHENLATLVAQSQSWGDLLADSQHLSLETQEILLAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHH LMELYPELVDVYQEQMNCDETLSLPSGKKIQNLLLTLEKNYRWAINTDFSLAENQYWFWY HHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCEEEEE RSQDKEEPRLGVRGEEPGDDRESLLDIGRQANRLYHALLEQAPELSLVEFLVQYPQYRTI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH ARRVWTMGHKAMGDIQMNVLHKASLPMHLLRCKLSMFGATTFDPRSDRWVRVTFFQGAPL HHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCH LDEIHSQTAQDDWLFPLLPNLNELLNNDQPLGSKGL HHHHHHHCCCCCCCCHHHCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA