| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945788
Identifier: 119945788
GI number: 119945788
Start: 2588484
End: 2589215
Strand: Reverse
Name: 119945788
Synonym: Ping_2124
Alternate gene names: NA
Gene position: 2589215-2588484 (Counterclockwise)
Preceding gene: 119945789
Following gene: 119945787
Centisome position: 56.79
GC content: 44.95
Gene sequence:
>732_bases ATGATTGTTTCTCACAATGAGTTAGTGGCCGCTGTAAACAAAGCATTCCTTGGTATGCGCCGTGCCTGTGGTGAAGCTGA TATCATCGCAAATATGGTTGCAGATTTACAAATAGTGGGCTTGCACGGTGTCCGTCACTTCAACAACGCCAGCGCCTTTA TGGGCTTAGAACGTGATTGTCCCGCCGACATTAAAGTCACTGGCGAAAATACTATTGAAGTTGATTTGCATAACTGCAGC TTGGCATGCTACTTGCCTGTTGTTATGGATTACGCCATTGAAAAGATGGTCGGTTTCAAGTCACTCAAGATCGAAATCAA TAACTGCCACAACCGTTGGCTGGCTTTTAGTGAGTTAGTGAAATTGGCCGCTAAGGGCATCGCCTGTACGGCAAAATGGG ATAATGGCAGCACCCCTAACCGTACTTTGTATGTGCTTAACGGTGGCCGTATCACACCTGAATTGTTTTTTTCTGATGAG ATTAATACCTTCGAACAACGATTGCATGACATGACCATCGAGCTTTCTGTTGGTGATTTCGACGTGGCTCGTCTGTCTGA AGGTTACAGTATACATGTTGATCCTAATAAGCTCGCGCAAGCTCAGAATAGTGCATGGAAAAATGGTATTTTTATCGAAG ATGGCGAGTGGAGTACTTTGAAAAAAAACGCTACGGCGATTCTTGTCGAAAGTAGCGAACAATCGGTAAAAGGCGCCGGT GGGCTTACCTAA
Upstream 100 bases:
>100_bases AAATTCACAGTCAAACTGCTCAGGACGATTGGTTGTTTCCATTATTACCTAACCTGAACGAATTGTTGAATAATGATCAG CCGCTCGGGAGCAAAGGGTT
Downstream 100 bases:
>100_bases ATCATAAAATTAAGGGTGTTGGCGGCGATCTTGTACGGCTAATGTTTCTCATCTTTATTTATCCTCAGGGAATGAGGCGT TAAAATCATTTCCTGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIVSHNELVAAVNKAFLGMRRACGEADIIANMVADLQIVGLHGVRHFNNASAFMGLERDCPADIKVTGENTIEVDLHNCS LACYLPVVMDYAIEKMVGFKSLKIEINNCHNRWLAFSELVKLAAKGIACTAKWDNGSTPNRTLYVLNGGRITPELFFSDE INTFEQRLHDMTIELSVGDFDVARLSEGYSIHVDPNKLAQAQNSAWKNGIFIEDGEWSTLKKNATAILVESSEQSVKGAG GLT
Sequences:
>Translated_243_residues MIVSHNELVAAVNKAFLGMRRACGEADIIANMVADLQIVGLHGVRHFNNASAFMGLERDCPADIKVTGENTIEVDLHNCS LACYLPVVMDYAIEKMVGFKSLKIEINNCHNRWLAFSELVKLAAKGIACTAKWDNGSTPNRTLYVLNGGRITPELFFSDE INTFEQRLHDMTIELSVGDFDVARLSEGYSIHVDPNKLAQAQNSAWKNGIFIEDGEWSTLKKNATAILVESSEQSVKGAG GLT >Mature_243_residues MIVSHNELVAAVNKAFLGMRRACGEADIIANMVADLQIVGLHGVRHFNNASAFMGLERDCPADIKVTGENTIEVDLHNCS LACYLPVVMDYAIEKMVGFKSLKIEINNCHNRWLAFSELVKLAAKGIACTAKWDNGSTPNRTLYVLNGGRITPELFFSDE INTFEQRLHDMTIELSVGDFDVARLSEGYSIHVDPNKLAQAQNSAWKNGIFIEDGEWSTLKKNATAILVESSEQSVKGAG GLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26677; Mature: 26677
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSHNELVAAVNKAFLGMRRACGEADIIANMVADLQIVGLHGVRHFNNASAFMGLERDC CEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECCEEECCCCHHHCCCCCCC PADIKVTGENTIEVDLHNCSLACYLPVVMDYAIEKMVGFKSLKIEINNCHNRWLAFSELV CCCEEEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHH KLAAKGIACTAKWDNGSTPNRTLYVLNGGRITPELFFSDEINTFEQRLHDMTIELSVGDF HHHHCCCEEEEECCCCCCCCCEEEEEECCEECEEEEECCCHHHHHHHHHCEEEEEEECCC DVARLSEGYSIHVDPNKLAQAQNSAWKNGIFIEDGEWSTLKKNATAILVESSEQSVKGAG CHHHCCCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCEECCCCEEEEEECCCCCCCCCC GLT CCC >Mature Secondary Structure MIVSHNELVAAVNKAFLGMRRACGEADIIANMVADLQIVGLHGVRHFNNASAFMGLERDC CEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECCEEECCCCHHHCCCCCCC PADIKVTGENTIEVDLHNCSLACYLPVVMDYAIEKMVGFKSLKIEINNCHNRWLAFSELV CCCEEEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHH KLAAKGIACTAKWDNGSTPNRTLYVLNGGRITPELFFSDEINTFEQRLHDMTIELSVGDF HHHHCCCEEEEECCCCCCCCCEEEEEECCEECEEEEECCCHHHHHHHHHCEEEEEEECCC DVARLSEGYSIHVDPNKLAQAQNSAWKNGIFIEDGEWSTLKKNATAILVESSEQSVKGAG CHHHCCCCCEEEECHHHHHHHHCCCCCCCEEEECCCCCEECCCCEEEEEECCCCCCCCCC GLT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA